KEGG   Desulforapulum autotrophicum: HRM2_23160
Entry
HRM2_23160        CDS       T00861                                 
Symbol
rhlE2
Name
(GenBank) RhlE2
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
dat  Desulforapulum autotrophicum
Pathway
dat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HRM2_23160 (rhlE2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dat03019]
    HRM2_23160 (rhlE2)
Enzymes [BR:dat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     HRM2_23160 (rhlE2)
Messenger RNA biogenesis [BR:dat03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     HRM2_23160 (rhlE2)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Shikimate_DH
Other DBs
NCBI-ProteinID: ACN15411
UniProt: C0QER9
Position
2637722..2639104
AA seq 460 aa
MSFEELGLRAELIKAVKTKGYIEPTPIQIRVIPAILNGQDILARAQTGTGKTDAFALPIV
EILARGKAHRRHPRALVLTPTRELALQVGESIKAYARRVSLRCTVVYGGVNVNPQIDRLK
RGVDILVATPGRLLDLAAFNRDVKLSKIEFLVFDEADRMLDLGFSDEISQILELVPQDRR
TMLFSATYTRQIRDLADKMLKTPEQIEVTPNTTVAESIVQKVHLVEKSNKRELLIHLITR
SDWRQVLVFTRTKHGANKLAERLAQVKISAAALHGNKSQSFRTRTLQEFKNGEIRILVAT
DVAARGLDITGLPHVVNYDMPSVAEDYVHRIGRTGRAGIQGVAVSLVSKEEKVFLKSVES
LLEQKIPVETVKGYTVDSAVPSFVLLRPDSPISEQRADKGLKEIVSKRNASKKSSKPGLK
IRSKPGSKIGAKPSQKPGQKTESKFRPGKSSKQGRPRGKK
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgtcatttgaagaacttggcctcagggctgaactgatcaaagcggttaaaacaaagggt
tacattgagcctacccccattcagatccgggttattccggcgattttaaacggacaagac
atcctggccagggcccagaccggaaccggaaaaacagatgcctttgcccttcccatcgtt
gagatactggcacggggcaaggcccacaggcgccatccccgtgccctggtgctcaccccc
acaagggaacttgccctccaggtgggtgaaagcatcaaggcctatgcccggcgggtctcc
cttcgttgtaccgtggtttatgggggtgttaatgtcaacccccagattgaccggcttaaa
aggggggttgatatccttgtggcaacccctggcagactgctcgatcttgccgcctttaat
cgggatgtaaagctctcaaaaatagagtttctggtgtttgatgaggctgacagaatgctg
gatctcgggtttagtgatgaaatctcccagatccttgaactggttccccaggatcgtaga
accatgcttttttccgccacctatacccggcagatcagggatcttgccgacaaaatgctt
aagactcccgaacagattgaggtgacgcccaacaccacggttgcggaatccatcgtccag
aaggttcacctggtggaaaaatccaacaagcgcgaacttctcattcatttaatcacccgg
agcgactggcgtcaggtcctggtctttacccgcacaaagcacggggcaaacaagcttgct
gaacggcttgcccaggttaaaatttccgccgcggccctccatggcaacaagagccagtcc
tttagaacccgcaccctccaggagttcaagaacggtgaaatccgcatccttgtggcaacg
gatgtggcggcaaggggacttgatatcacaggcctgccccatgtggtcaattacgatatg
ccgtctgttgccgaagattatgtgcatcgtatcggccgtacaggccgtgccgggatccag
ggcgttgccgtctcactggtctccaaggaggaaaaagtttttctgaaatctgttgagagc
cttcttgagcaaaagatccccgtggaaacagtcaaagggtataccgtggacagtgcggtt
ccaagttttgttctgctgcgcccggacagcccgataagtgaacaacgggcagacaaaggt
ttaaaagagattgtcagtaaaagaaacgcctccaagaagagcagcaaacccggtttaaaa
atccgatccaaacccggctcgaaaatcggggcaaaaccaagccaaaaacctggccaaaaa
accgaatctaaattccgcccaggaaaatcgtccaaacagggcagacccaggggtaaaaaa
tag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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