KEGG T00655: Daud

Candidatus Desulforudis audaxviator: Daud_0596

Entry

Daud_0596 CDS T00655

Definition

ATP dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

dau Candidatus Desulforudis audaxviator

Pathway

dau03410	Base excision repair
dau03420	Nucleotide excision repair
dau03430	Mismatch repair
dau03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:dau03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:dau03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:dau03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:dau03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

632689..633621

AA seq 310 aa
MNTKFSPMEPVSWPAPFNDPGFVHQLKWDGIRIIAEVRGDEVVLRTRRGGVRTETYPELR
VLSRILKGEAAVLDGEAVVLDEEGCPSFGRILRRDQTRRVTAALRRDLPVQYVVFDVLLL
DGESLLDRPFTERQEILAGILPEEAPVAICRSLPDGVELFKATGRLGLEGIVSKELAGRY
HPGRKHPTWRKVKHFRRLEAVVGGVVLKRGRANALLLGLYSGRNLVYIGRAATGLSERDL
TVLTGMARTHAAGRSPFKNTPAAGRGLEVAWLETPLTARVRFIGWTDQGRLRNPVLEGFN
DQAAGDCVFP

NT seq 933 nt +upstreamnt +downstreamnt
atgaacacaaagttttcgcccatggagcctgtttcctggccggcgccgttcaatgacccg
ggttttgtgcaccagttgaaatgggacggcatccggatcattgcggaggtccggggggac
gaggtggtgctccgtacgcgccggggcggggtgcggaccgagacctaccccgagcttcgc
gtgctcagcaggatcctgaagggggaagcggccgttctggacggcgaagcggtggtcctc
gatgaggaaggttgtccgagcttcgggcggattctgcggcgcgaccagacccgcagagtg
acggccgccttgaggcgggacctgccggtgcagtacgtggtgtttgacgttttgcttctt
gacggggaatcactgctggatcggccctttacggagcggcaggaaatcctggcggggatt
ctgccggaagaggcgccggtggcgatttgccggagtctcccggacggcgtggaactgttc
aaagccacgggccgccttggactggaggggattgtgagtaaagagctggccggccggtac
cacccggggcgtaaacaccccacctggcgcaaggtgaagcatttccgccggttggaggcg
gtggtgggcggtgtcgtgttgaagcggggacgggccaacgccctgctgctcggtctttac
tccggccggaacctggtctatatcggccgggccgccaccggactttcggagagggacctg
acggttttgaccggaatggcccgcacccacgccgccggccgttccccgttcaagaacaca
cccgcggctggccggggcctggaggttgcctggctcgagacgcccctgacggcacgcgtg
cggttcatcggctggaccgatcaggggcggctgcggaacccggtgctcgaaggcttcaac
gaccaggcggccggggactgcgttttcccttag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-DAU (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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