KEGG T00655: Daud

Candidatus Desulforudis audaxviator: Daud_0818

Entry

Daud_0818 CDS T00655

Definition

recombinase D (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

dau Candidatus Desulforudis audaxviator

Pathway

dau03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:dau03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 HHH_4 AAA_19 Viral_helicase1 AAA_11 HHH_5 AAA_22 AAA_12 UvrD_C Helicase_RecD AAA AAA_16 AAA_28 NTPase_1 AAA_25

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

863295..865361

AA seq 688 aa
MTETITDTVNRFIFKTETFAIFKLDNIVALGDVAGVREGDRLTVTGSWQEHPKYGRQLRV
EHWEKPVPSTEEAAADFLSSGLIKGVGPVLAERIVSVLGPNAVSAILEDPDVLKKVKGIG
KKAPEIRRQLQETYQVQQVVAELIRLGLTLKTAMKAYMKFGRPAAEYVRRNPYCLTELDL
IGFHRADDIARRAGLAPDSSFRVKAGILYVLNESLWDEGHAYLPRDELISRSLTLLNHVE
KSVSLDIVEKELSRLKGVHGSAEVSLAWAREYEEEIARDVKRLARQRFDVPPLPRDLIRG
IELTPDQNAAVKTALESGFSILTGGPGVGKTQTVRAVIRAFELQNPWGGVFLCAPTGRAA
RRLSEVTGRQAHTVHKLLGLRNGHADRNRKNPLECDLLILDEASMACLVLTKRLLEAVPN
NARILFVGDADQLPSVGPGNILRDLLDKVPTVRLTEIFRQAAESQIVTNAHRINRGQMPL
IDRSKTDFIFLEREDPEDIAKCVATCASGMGYDPLDVQVLSPMRKGPVGTAELNKLIQGG
MSGPRVKYGQYVFHVGDKVIHTKNNYDKGVFNGDIGIIKKIKMQHDVLVQYSSGLVSYSG
DDLRELEPAWAVTVHKAQGSEFKAVIIPVTTSHYVMLHRNLIYTAVTRAREKVILVGTKK
ALAIAVRNNKPIQRYTALSGLLRDAPRR

NT seq 2067 nt +upstreamnt +downstreamnt
atgacggaaaccatcaccgacaccgtaaaccggttcattttcaaaactgaaaccttcgcc
attttcaagcttgataacattgttgcgctgggcgatgtcgctggcgttcgcgagggcgac
cgcttgaccgttactggctcctggcaggagcatcctaaatacggcaggcagctcagagtc
gaacactgggagaaacccgtcccgtccaccgaagaagccgctgcagactttctttcttcc
ggcctgatcaagggcgtgggcccggtattggcagagcgaattgtgagcgttcttggtccc
aatgccgtgagtgcgattttggaagatccggacgtattgaagaaggtcaagggcatcggc
aaaaaagccccggaaattcgccgtcagcttcaggagacctatcaagtgcagcaggtcgta
gcagagctgatacggcttgggctcactttgaaaacggcgatgaaggcttacatgaaattc
ggccgcccggccgccgagtacgttcggagaaacccctactgcctgaccgaactggatctg
atcgggttccaccgggcggacgacattgcccggcgggccggcctggctccggattcttct
tttagagtcaaggccggaatactgtatgttttaaacgaatctctctgggacgagggtcat
gcctacctgcccagggatgagctcatttcccgctccctgaccttgttgaaccatgtcgaa
aaaagcgtgtcgctggacattgtggagaaagaactctcccgccttaaaggggttcacgga
agtgcggaagtctctctggcctgggccagggagtacgaagaagagatcgcccgggacgtg
aaaaggttggcccggcaacggttcgatgtaccgcctttgccccgggatctgatcaggggc
attgagctgacccctgaccagaatgcagcagttaagactgcgctggagagcggcttttct
atcttgaccggcggtcccggcgtgggcaagactcagactgtaagggcggtcatcagggcc
ttcgagttgcagaacccttgggggggagtatttctttgcgctcctacagggagagcagcc
agaaggctttcggaggtgaccgggcgccaggcgcacaccgtgcacaagcttctgggcctc
cggaacggccacgcagaccgcaaccgcaaaaacccgctggaatgcgatctgttgattttg
gacgaagcgagcatggcctgcttggttttgaccaagcgcctcctcgaagccgttcccaac
aacgccaggatccttttcgtcggagacgcggaccagcttccgagcgttggcccgggcaac
attttgcgcgatctgctggacaaagttccgactgtccgcctgaccgaaatctttcgccag
gctgccgagagccagatcgtaacgaacgctcaccggataaataggggccagatgccgctg
attgaccgctcgaagacggactttatattcctggaaagagaagatccggaagacatcgca
aagtgcgtggcgacttgcgcttccgggatgggttacgatcctttggacgtgcaggttctt
tcgccgatgcgaaagggcccggtggggacggctgagctcaataagctcatccaggggggg
atgtccggccccagggtgaaatacggccagtacgtcttccatgtgggcgacaaggtgatc
cacacgaagaacaactatgacaaaggggttttcaacggcgacatcgggattatcaagaag
atcaagatgcagcacgatgtcctggtgcagtacagcagcggcctggtttcctattccggg
gatgacctgagagagcttgagccggcgtgggcggtcacggttcacaaggctcagggctct
gagtttaaggctgtaataattcccgtcaccacctctcactatgtcatgctgcaccgcaac
ctgatctataccgccgtcaccagggccagggaaaaagtgattctggtgggcacgaagaag
gctttggccattgcggtgcgcaacaacaagccgattcagcgttacaccgcgctttcgggc
ctcctgagagacgcgccccgccgttaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-DAU (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (26)   

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