KEGG   Candidatus Desulforudis audaxviator: Daud_2173
Entry
Daud_2173         CDS       T00655                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
dau  Candidatus Desulforudis audaxviator
Pathway
dau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Daud_2173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dau03021]
    Daud_2173
   03019 Messenger RNA biogenesis [BR:dau03019]
    Daud_2173
Transcription machinery [BR:dau03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Daud_2173
Messenger RNA biogenesis [BR:dau03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Daud_2173
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_22 ATPase_2 NACHT OB_RNB AAA_25 AAA Spore_III_AA AAA_18 Mor AAA_14
Other DBs
NCBI-ProteinID: ACA60660
UniProt: B1I6H8
Position
complement(2285230..2286708)
AA seq 492 aa
MSATALENKTLAELQNLAKELKIPAYYRYRKKELIAEIERIQQDLRPTREASPPEAEPVP
VPPTALVEQRRQEPREAALHYHPQTQPYPPPHHDTGRMLPDRSRLFQAQGYLEILPEGYG
FLRPSQFLPSNDDIYVSASQIRKFDLRTGDLVSGQVRPPKDTEKYLALLRVETVNGEEAA
LAGRRRHFDELTPLYPQERLTLETSPDRIAARIIDLISPLGKGQRGLIVAPPKAGKTTLL
KEIANSITSNHPEVVLMILLIDERPEEVTDIQRSVKAEVIASTFDEPAENHVRVTEMVLE
RAKRLVEHKKDVAILLDSITRLGRAYNLVVPTSGRTLSGGVDPAALHKPKRFFGAARKIE
EGGSLTILATALIETGSRMDEVIFEEFKGTGNMELILDRRISERRIFPAIDVQRSGTRKE
ELLLTSDELELMWYFRKTTNQMSSSDAMEHLIEEMRRTRSNRDLLRNFQAFKQAAGGPPE
GWMMPGPPIHRK
NT seq 1479 nt   +upstreamnt  +downstreamnt
ttgtccgcaactgcactggagaataagacgcttgccgaactccaaaatctcgccaaagaa
ctcaaaatcccagcctactaccgttaccggaaaaaggagctgatcgctgaaatagaacgg
attcaacaagatctccggccgactcgagaggcgtccccgccggaagcagaaccggttccg
gtgccccccaccgcgctggtggagcagcgacgccaggaaccccgggaggcggcactgcat
taccacccgcagactcaaccctacccgcctccgcaccacgacaccggccggatgttaccg
gaccggagccggttgttccaggcgcaaggctatctggagatcctgccggagggctacggg
ttcttaaggccgtcccagttcctgccgtcgaacgacgatatctacgtgtcggcctcgcag
atccgcaagttcgacctgcgtaccggcgacctggtttcggggcaggtgcggccgcctaag
gacaccgagaaatacctggccttgttgcgggtggagaccgtgaacggggaagaggctgcc
ctggccggccggcgccggcacttcgatgagcttacgccgctgtatccccaggagcggctc
accctggagacctctcccgaccgaattgcggcccggatcatcgacctgatctcgccgctt
gggaaagggcagcgggggttgatcgtcgcgccacccaaagccggtaagaccacgctcttg
aaggagatcgctaacagcatcacgagcaatcacccggaagtggtcctgatgattctcctg
atcgacgagcgtcccgaggaagtaaccgatatccagcgttcggttaaggccgaagtcatc
gcctccaccttcgacgaaccggcggagaaccacgtccgggtgacggaaatggttctggaa
cgggccaagcggctcgtagagcacaaaaaggacgtggctatcctgctggacagcatcacg
cggctcggacgggcgtacaacctggtggtgcccacttccggccggaccctgtcgggcggg
gtagacccggcggcgctgcacaagcccaagcgcttcttcggcgcggcccgcaaaatcgag
gagggcgggagcctgaccatcctcgcaacggcgcttatcgaaaccggcagccggatggat
gaggtcattttcgaggagttcaagggaaccgggaacatggagttgattttggaccggcgg
atctcggaacggcgcatcttcccggcgattgacgtgcagcgttccggcacgcgtaaggag
gaactgctgcttaccagcgatgaactggaactcatgtggtacttccgcaaaaccacaaac
cagatgtcctcttcggatgcgatggaacacctgattgaagagatgcggcgtacccgatcc
aaccgcgatttgctgcgcaacttccaggccttcaagcaggcggccggcgggccgccggaa
gggtggatgatgccgggccccccgatccaccgcaaatag

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