KEGG   Desulfurella acetivorans: DESACE_01980
Entry
DESACE_01980      CDS       T03007                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
dav  Desulfurella acetivorans
Pathway
dav03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DESACE_01980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dav03021]
    DESACE_01980
   03400 DNA repair and recombination proteins [BR:dav03400]
    DESACE_01980
Enzymes [BR:dav01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     DESACE_01980
Transcription machinery [BR:dav03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     DESACE_01980
DNA repair and recombination proteins [BR:dav03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      DESACE_01980
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2
Other DBs
NCBI-ProteinID: AHF96715
Position
368666..369673
AA seq 335 aa
MSNDIFEYLQLPQEIKVERINERHERFILEPINEGFATTIGNALRRVLLSSIQGIGIVGI
KIEGVEHEFSGVNGVKEDVITIILNLKDVIFKSLSENFKECVLKINKKGPGVLKASDIEL
TSDLKIINPNHYIAQLNDNVDFHAEIYLKKGIGYKQSNQESANREIGYIPVDALFTPIRR
VSFSADKSMERGFYDYERLVLEVETDGSITPKEALGQASYILNSHFNLFIGSFKEPEPDL
GYGNDNEEIDENLLKTVDDLELNVRASNCLRNHDIKYIWQLVQKTDLDLLNTRNFGKQSL
KEIKAALKQMGLSLGMTFDEKYIKRIEEAIKRSEE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgagtaatgatatttttgaatatttacagttgccccaagaaataaaagttgaacgtata
aatgaaaggcatgaaagatttatattagagcctattaatgaaggttttgctactactata
ggcaatgctctaagaagggtattgttatcatccattcagggtattggtatagtgggtata
aaaatagaaggcgtagaacatgaatttagcggagtaaatggcgttaaagaagatgttatt
actattattttaaatttaaaagatgtaatttttaaaagtttgtctgaaaactttaaagaa
tgtgttttaaaaataaataagaaagggcctggtgtgttgaaagccagtgatatagaattg
acttctgatcttaaaatcataaatccaaaccattatattgctcagcttaatgataatgtt
gattttcatgctgaaatttacttaaaaaaaggcatcggctacaaacaatcaaatcaggaa
agcgctaatagagaaattggctatattcctgtagatgctttgtttactcctataagacgc
gtgtcttttagtgcagacaagagtatggaaagaggcttttacgattatgaaagattagta
ttagaagtggaaacagatggtagtattacaccaaaagaagctttaggacaggcaagctat
attttaaattctcattttaatttatttataggtagttttaaagaaccagagccagattta
ggatatggcaatgataatgaggaaatagatgaaaatcttttaaaaactgttgatgatctt
gaattgaatgtaagggcttctaactgtttgagaaatcatgatataaaatatatttggcaa
ctagtacaaaagacagatttagatttacttaacacaagaaattttggtaaacaatcattg
aaagaaattaaagcagctttaaaacaaatgggtttaagtttaggtatgacattcgatgaa
aaatatataaaacgaatagaagaagccataaaaaggagtgaggaatga

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