KEGG   Desulfomicrobium baculatum: Dbac_0582
Entry
Dbac_0582         CDS       T00963                                 
Name
(GenBank) RNA modification enzyme, MiaB family
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
dba  Desulfomicrobium baculatum
Brite
KEGG Orthology (KO) [BR:dba00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dba03016]
    Dbac_0582
Enzymes [BR:dba01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     Dbac_0582
Transfer RNA biogenesis [BR:dba03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    Dbac_0582
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM TRAM_2 PutA_N
Other DBs
NCBI-ProteinID: ACU88706
UniProt: C7LX33
Position
655966..657300
AA seq 444 aa
MRFHILTFGCQMNVADADWLTQSLVSRGWTEAGESDAQVFVVTTCSVREKPEQKVYSLLG
RLKSYADRSPDVFVAVGGCVAQQIGEEFWNRFPFVRLVFGTDGTAMVPQALERLANDPAL
RISLLDFLDHYPEREQPEGGTVQAQAFVNIMQGCDNFCAYCIVPFTRGRQKSRSSDAVVA
ECEALVRRGARELTLLGQNVNSYGQDKHGDGTSFASLLERISAIPGLMRLKFTTSHPKDI
APEVVTAFGKLPNLCPQLHLPVQSGSDAVLKAMGRKYTRARYLDTIRELRRVCPQITLTT
DIIVGFPGETLQDFEDTLELMREVRYESSFSFKYSDRPGVRAEKMDFKVPEEEKSRRLAV
LQEMQDRITVEELAAQVGSMAEVLVEGPSKMQDSEYIFWRGRDGGGRIVNFSSPIPCLTG
RMVRVRIVDAKKHSLVGEIRGEPW
NT seq 1335 nt   +upstreamnt  +downstreamnt
gtgaggtttcatatactgacttttggatgccagatgaatgtggcggacgccgactggttg
acccaatctttggtctccagaggctggaccgaggcgggcgaatccgacgcccaggttttc
gtggtcacgacgtgcagcgtgcgggaaaagcccgaacagaaagtgtattccctgctcggc
cggctgaagagctacgccgaccggagtccggatgttttcgtggccgtgggcggctgcgtg
gctcagcagatcggcgaggaattctggaaccgttttcctttcgttcgcctggttttcggc
accgacggaacggccatggtgccccaggctctggagcggctggccaacgaccctgcgcta
cggataagcctgcttgattttctggaccattatcccgaacgcgaacagcccgaaggcggt
actgtccaggctcaggcctttgtgaacatcatgcaggggtgcgataatttttgcgcctac
tgcatcgtgcctttcaccaggggacggcagaaatcgcgcagctcggacgccgtggtggcc
gaatgcgaggccctggtgcgtcgtggcgcgcgcgaactgacccttttggggcagaacgtg
aacagctacggccaggacaagcatggcgacggaacatcctttgcgtcgctcctggagcgg
atatccgccattcccggcctcatgcgcctcaaattcacgacatcgcatcccaaggacatc
gccccggaggttgtgaccgcattcggcaaactgcccaatctttgcccgcagctgcatctg
cccgtgcagtccgggtccgacgcagtcctgaaggccatggggcgcaaatacacacgggcg
cgttacctggacacgatccgcgagctgcgccgggtttgcccgcaaattaccctgaccacg
gacatcattgtcggttttccgggcgagactcttcaggattttgaagatactctggaactt
atgcgtgaagtgcggtacgaatccagcttctccttcaagtattcggaccggccgggggtg
cgcgccgaaaagatggatttcaaggtgcccgaagaagagaagtcgcggcgtctcgcggtg
ctgcaggagatgcaggaccgaatcaccgtcgaggagttggccgcgcaggtggggtcgatg
gccgaagtgctggtcgaagggccgagcaagatgcaggacagtgagtatattttttggaga
ggccgtgacgggggcggacggattgtcaatttctcatcgcccataccttgcctgactggc
agaatggttcgcgtgcgcatcgtggacgcgaagaaacactccctcgtgggagagattcga
ggtgaaccgtggtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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