KEGG   Desulfotomaculum nigrificans: Desca_0245
Entry
Desca_0245        CDS       T01498                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
dca  Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:dca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dca03016]
    Desca_0245
Enzymes [BR:dca01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     Desca_0245
Transfer RNA biogenesis [BR:dca03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Desca_0245
 Prokaryotic type
    Desca_0245
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-ProteinID: AEF93149
UniProt: F6B5S6
Position
250394..251143
AA seq 249 aa
MGMKNIKLTVAYDGTNYHGFQEQRGTGLATVQEVLEAALSKVANETVQVIGAGRTDAGVH
ARGQVVNFRSTNWPVPTEKIHLAVNSLLPDDIAVIKAEEVPLDFHARFSATAKTYRYSIY
NHRVMSPLHRLYAYHEPRPLDIEAMRQAAQYLLGTHDFKSFQAQGTPVKDTVRTIYRAEL
VSEPPLIHLYLRGNGFLYNMVRIITGTLLDVGKGKKFPPEMKSIIEARNRTRAGTTVPPH
GLCLMEVEY
NT seq 750 nt   +upstreamnt  +downstreamnt
atgggaatgaaaaatattaagttaacggtggcctatgacggaacaaactaccacggcttt
caagagcagcggggaaccggcttagctaccgtgcaggaggttttggaggctgcgttaagc
aaagtggctaatgaaacagtgcaggtcataggagccggccgcaccgatgccggggtccat
gcccgggggcaggtggtcaacttccgcagtacaaactggccggtaccaacggagaagata
catttggccgttaactcactgctgcccgatgacattgcggtgattaaagccgaagaggtg
ccgctggattttcacgccagattttctgccaccgctaagacctaccgttattccatctat
aatcaccgggtcatgtccccgttacaccgcctgtatgcttaccacgaacccagaccgctc
gatatagaggccatgcggcaggcagcccaatacctgttaggtacccatgattttaaaagt
ttccaggcccagggtacgcctgttaaagataccgtaagaaccatttatcgggcggaactt
gtctcagaaccacccctgatccatttgtacctgaggggaaatggctttctatataatatg
gtacgcattatcaccggcaccctactggatgtaggaaaagggaaaaaattccccccggaa
atgaaaagcataatcgaggcccgtaaccgtaccagagctggcacaaccgtcccaccccac
ggcctttgtttgatggaagtggaatactag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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