KEGG   Daucus carota (carrot): 108223278
Entry
108223278         CDS       T05350                                 
Name
(RefSeq) vesicle-fusing ATPase-like
  KO
K06027  vesicle-fusing ATPase [EC:3.6.4.6]
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dcr04131]
    108223278
Enzymes [BR:dcr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.6  vesicle-fusing ATPase
     108223278
Membrane trafficking [BR:dcr04131]
 SNARE
  SNARE associated proteins
   Others
    108223278
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_2 AAA_16 AAA_5 AAA_2 CDC48_N AAA_22 TIP49 RuvB_N AAA_24 AAA_7 AAA_14 nSTAND3 Mg_chelatase RNA_helicase AAA_18 ATPase TsaE AAA_19 ABC_tran bpMoxR AAA_11 AAA_3 SLFN-g3_helicase DUF5033 Parvo_NS1
Other DBs
NCBI-GeneID: 108223278
NCBI-ProteinID: XP_017252931
Position
5:40012002..40023870
AA seq 732 aa
MGSRSMIVVSTPGKDLVYSNLAYCSASDLRQFAVAGSQSRFLALVGDVFVLSLSAHDGIQ
NGQIGLNSIQRRYARVSTGDSISVSRFSPPEIFDLALLTLELEFVKKGTKEEHVDAVLLA
QQIRKRYSNQVMTTGQRVTFEYHGNNYIFTVNGASVEGEDKSERGMITDDTYIVFETQSS
SGIKIANQREGASSNIFKHKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIK
HVKGMLLYGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQ
DQRSKGDQSELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIG
MTNRKDLLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKESSFLAPDVNLQELAA
RTKNYSGAELEGVVKSAVSYALNRQLNLEDLTKPVDEDNIKVTMEDFLNALHEIIPAFGA
STDDLERCRLNGIVECGGRHEHIFKRTMLLAEQVKVSRGSPLVTCLLEGPSGSGKTAMSA
TVGIGSDFPYVKIVSAETMIGLSESTKCAQIVKVFEDAYRSPLSIIILDDIERLLEYVAI
GPRFSNLISQTLLVLLKRLPPKGKKILVIGTTSELNFLDSVGLQDAFSVTYNVPTLKTED
AKKVLEQLNVFAEEDIDSAAEALNDMPIKKIYMVIEMAAQGEEGGGAEAIYSGKEKIKLM
HFYDCLQDVIRY
NT seq 2199 nt   +upstreamnt  +downstreamnt
atggggagtcgatcgatgatcgtggtgagcacgccaggcaaagatctcgtttacagtaac
ttagcctactgctctgcctcagatcttcgccaattcgccgtcgccggatctcaatctcgc
tttctcgcgctcgtcggcgatgttttcgtgctctctctttctgctcatgacggtattcaa
aatggccaaattggactcaattcgattcaacgtcgttatgcaagagtttctactggagac
agtatatcagtcagcagattttctccacctgaaatatttgaccttgctctgcttactctt
gaactggagttcgtgaaaaaagggactaaagaagaacatgttgatgctgttttgttggcg
caacaaattcgaaagagatatagtaatcaggttatgactacaggacaaagagtaacattt
gaatatcatggaaataattacattttcaccgtcaacggggctagcgtagagggggaagac
aaatcagagagagggatgatcacagatgatacatacattgtgtttgaaacacaaagctct
agtggaataaagattgccaaccagcgtgaaggtgctagcagcaacatattcaagcataaa
gagtttaaccttcagtctttaggtataggtggattgagtgcagagtttgcagatatattt
cgaagagcatttgcctcaagggttttccctccacatgtgacttcgaagctgggcatcaaa
catgtcaagggaatgctgctttatggacctcctggtactggaaagactctaatggctcgc
caaattggaaaaatgttaaatggcaaggaccctaagattgtcaatgggcctgaagttttg
agtaagtttgttggggagacggaaaagaatgtaagagatttatttgcagacgctgaacag
gatcaaagatcaaaaggggatcaaagtgaattacatgttatcatcttcgatgaaattgat
gcgatttgtaagtccagaggttcaactagagatggtactggagttcatgatagtattgtc
aaccagcttcttacaaagatagatggtgtggagtctctaaacaatgtgctgcttattggg
atgaccaacaggaaggatctgcttgatgaagcacttttaaggcccggacgtttagaagtc
caagtggagattagtcttccagacgagaatgggcgtttacaaatccttcaaattcacaca
aacaaaatgaaggagagttcctttcttgctcctgatgtgaacttgcaagagcttgctgcc
cggacaaaaaattatagcggagcagaactagaaggggtcgtgaaaagtgctgtatcctat
gctttaaaccggcagctaaatctggaagatcttaccaaacctgtggacgaggataatatt
aaagttactatggaagattttcttaatgcccttcatgaaattattcccgcatttggagca
tctactgatgatcttgaacgttgcagactcaatggcatagtggagtgtggcgggcgacat
gagcacatatttaaaagaactatgctactagcagagcaagtcaaagttagcagaggaagt
ccccttgttacatgtttgttggaaggcccaagtggcagtgggaagactgcaatgtcagct
actgttgggatcggcagtgatttcccctacgtcaagatagtttcagctgaaacaatgatc
ggcctcagtgaaagcactaaatgtgcccagatcgtcaaggtattcgaggatgcttatagg
tcaccattaagcattattatccttgacgatattgaaaggcttctggaatacgttgcgatt
ggtccacggttttcaaatttaatttcccaaactttattggtcctgcttaaacggcttcct
ccaaagggaaaaaaaattctggtcattggaactacaagtgagctgaactttttggattct
gttggtcttcaagatgctttttcggtcacatacaatgtcccaactctgaaaacagaagat
gcgaaaaaggtcttggaacagctaaatgttttcgcagaggaagatattgattctgctgca
gaggccctaaatgatatgccaatcaagaagatatacatggtgattgaaatggctgctcaa
ggagaagaaggtggcggagcagaagctatttactctgggaaagagaagatcaaacttatg
catttctatgattgtctacaagatgttatccggtattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (27)   
   Pfam (27)   
All databases (38)   

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