KEGG   Dendrobium catenatum: 110101229
Entry
110101229         CDS       T05027                                 
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
dct  Dendrobium catenatum
Pathway
dct03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    110101229
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dct03009]
    110101229
Enzymes [BR:dct01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     110101229
Ribosome biogenesis [BR:dct03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    110101229
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-GeneID: 110101229
NCBI-ProteinID: XP_028555039
Position
Unknown
AA seq 269 aa
MVRAYRIKVPNPMKRKRSEEEIGSETADNIDHGIDDEGKTEDVIGDMPGIPVMSLVDGSK
KPSMIFILDKAPLEIGKVGNKHVLLNSDEHANFLKKQSKDPSEYRPDIVHQALLAILDSP
LTKAGRLQALYVRSTRHALIEVKPHVRIPRTFRRFCGLMVQLLEKQKITAVGNREKLLTL
IKNPVTDHLPVNSRKIGLSYSSDKLVQVRDYVAAASDNVNLVFVVGAMAHGIIDKGFIDD
FISVSNYPLSAACCISRICNALEQKWNIL
NT seq 810 nt   +upstreamnt  +downstreamnt
atggttcgtgcttaccgaattaaggttccgaatcccatgaagcggaagagatcggaggag
gagattggatccgaaactgcagataacatagatcatggcatagatgacgagggaaaaact
gaggatgtgatcggagacatgccggggatccctgtcatgtccctagtggatgggtcgaag
aagcctagtatgatattcatcctcgataaggccccgcttgagatcggaaaagttggtaac
aaacatgtgcttctgaactctgatgagcatgcaaattttctaaaaaagcagagcaaagat
ccttctgaatataggcctgacattgttcatcaggcacttcttgccatattggatagcccc
ttaactaaggctggtagactgcaagctctatatgtacgttcgacacggcatgcactcatt
gaagtcaaaccacatgttcgtattccaagaactttcaggcgattctgcggtcttatggtg
cagttgttagaaaagcaaaaaattactgctgtaggcaatcgtgagaagcttctcactttg
attaagaatcctgtaacagatcacttacctgttaactcaagaaaaataggcctatcatat
agttctgataaattagttcaagtgcgtgactatgttgctgctgctagtgacaatgtcaat
cttgtttttgtggtgggtgctatggctcatggaatcattgataaaggatttatagatgac
ttcatatcagtttcaaattacccactcagtgcagcttgctgcataagccggatatgcaat
gcgctggagcagaaatggaacatattataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (31)   

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