KEGG   Dendrobium catenatum: 110114380
Entry
110114380         CDS       T05027                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 53
  KO
K16911  ATP-dependent RNA helicase DDX21 [EC:5.6.2.7]
Organism
dct  Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:dct00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dct03009]
    110114380
   03036 Chromosome and associated proteins [BR:dct03036]
    110114380
Enzymes [BR:dct01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     110114380
Ribosome biogenesis [BR:dct03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    110114380
Chromosome and associated proteins [BR:dct03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    110114380
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 AAA_30
Other DBs
NCBI-GeneID: 110114380
NCBI-ProteinID: XP_020702898
Position
Unknown
AA seq 658 aa
MATALFFFTPSSAVISFPPQNPNLNILLTRSSPLAIPVSANPNVIPRRWSAVPFLSAKAL
RTAVPTIPVEGELLDISKIGISEQIVTALSHRGITELFPIQRAVLEPAMEGRDMIGRAIT
GSGKTLAFGIPILDKIIRDQTQSWKKRVPSALVLAPTRELARQVQREFKISAPNLQSTCI
YGGIPIMSQVRALGYGMDIVVGTPGRIIDLFERGALDLSEVKFVVLDEADQMLAVGFQED
VERILSYLPRKKQCMLFSATMPQWIHDLSRKYLRDPVIVDLVGDSDQKLAEGISLYSVSS
TSPNKQNLLPTLISMYAQGGKSIIFTKTKRDAESLSRSMGVVIGSKALHGDMQQSQRDKT
LAAFRDGRFRALVATDVAARGLDIPNVDLVIHFEIPNTPDIFLHRSGRTGRAGNKGTTVL
MFTEGQRRTVRSIEQDLGCKFEELRGITGEGGKRSSDRYDDNSWLSEDGSDDNAQYGNYR
RSPKPNNYRSSESNFRSQSYYSDNSRYGNNERFKKFNSYGNSQDYSRNQSPESDNSQYEN
HGRFRKLNSNGNSQNSFRNQSHDSVHAQYGNNGRFRSQGSPRKNKFSKPYQSVLDQNSTN
RSSFSLDSLDHWNESNTDEKFDFPAESTRSKRTYGSRKHHQKKSETDNDNFDSLFDLF
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggcaaccgcactcttcttcttcactccctcctccgccgtcatctccttcccgccccaa
aaccctaatctcaatattctcctcactcgctcctcgcctctcgccattcccgtctcagct
aatcctaatgtcatccctcgcagatggtcggctgttccgtttctcagcgcgaaggcgctc
cgcaccgccgttccaaccatacctgtcgaaggagagctcctcgacatctcgaagatcggc
atatcggagcagatcgttactgctctctctcaccgcggcatcactgaactgttccctatt
cagagagctgtcttggagcctgcaatggaaggccgtgatatgattggaagggctataact
ggatcaggaaaaactcttgcatttggtattcccatattggataaaattatccgggatcag
actcaaagctggaaaaaacgagttccctctgctcttgtattggcgcctacacgtgaactg
gcacgtcaggtgcaaagggagttcaaaatttcagctccgaatttgcaaagtacttgcatt
tatggtggaataccaattatgagccaagtgcgtgctcttggatatggcatggatattgtt
gttggaacaccgggaagaattattgacttatttgaaaggggtgccttagatctttctgaa
gtaaaatttgttgtgttggatgaagctgatcagatgttagcagtaggctttcaggaggat
gttgaacgtattttaagttacctacctagaaagaaacaatgcatgctgttttctgcaacg
atgcctcaatggattcatgatctgtcaaggaagtatttgagagatcctgtaatagtagat
cttgttggagactctgatcagaagttagctgagggtatctcactctattctgtttcctca
acctctcctaacaagcaaaatctccttcccactttgatttcaatgtatgctcaaggtggt
aaaagtattattttcaccaaaacaaagagagatgcagagtcactctcaaggtccatggga
gttgtaattgggagcaaagcattgcatggagacatgcagcagtcgcaaagggacaaaact
cttgctgctttccgtgatggacggtttcgtgcattagttgctacagatgttgctgcacgt
ggtcttgatatccctaatgttgatctggttattcattttgaaattccaaacactcccgat
atttttcttcatagatctggcagaactggtcgtgctggtaataaagggaccacagtactt
atgttcactgaaggtcaacgtcgtacagtcagaagcattgagcaggatttaggatgcaaa
tttgaggagctgcgaggcattactggtgaaggtggaaaaaggagctctgacaggtatgat
gataattcttggctgtccgaagatggctcggatgataatgctcaatatggaaattataga
cggtccccaaagcctaacaattatagaagctctgaaagtaacttcagaagtcaatcttat
tattctgataattcacgttatggaaataatgagagatttaaaaagttcaactcttatgga
aattctcaagattactcaagaaatcaatctcctgaatccgataattcacagtatgaaaat
catgggagattcagaaagttaaactctaatggaaattctcaaaatagtttcagaaatcaa
tctcatgactctgttcatgcccagtatggaaataatgggagatttagaagccagggaagt
cctagaaaaaacaaattttcaaagccctaccagtctgttcttgatcagaattcaacaaac
agaagttccttttcattggatagcttagatcactggaatgaaagcaatacagatgagaaa
tttgattttcctgcagaatctacaagatcaaaaaggacatatggctctcgtaaacatcat
cagaagaaatcagaaactgataatgataatttcgattccttgtttgatttgttttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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