KEGG   Dickeya parazeae: Dd586_3106
Entry
Dd586_3106        CDS       T01138                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ddc  Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:ddc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ddc03019]
    Dd586_3106
   03009 Ribosome biogenesis [BR:ddc03009]
    Dd586_3106
   03036 Chromosome and associated proteins [BR:ddc03036]
    Dd586_3106
Enzymes [BR:ddc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Dd586_3106
Messenger RNA biogenesis [BR:ddc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Dd586_3106
Ribosome biogenesis [BR:ddc03009]
 Eukaryotic type
  90S particles
   RNase
    Dd586_3106
 Prokaryotic type
  rRNA processing factors
   Dd586_3106
Chromosome and associated proteins [BR:ddc03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Dd586_3106
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: ACZ77941
UniProt: D2BU94
Position
complement(3536073..3536753)
AA seq 226 aa
MNPILINRLQKKLGYTFQQYDLLLQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSNIQTIERLILSWYQTRLDEISPGDKQKDPKTRLQEFLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGFSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccatcctgataaatcgtttacaaaaaaagctgggctatactttccaacaatat
gaccttttattgcaggcactgacccaccgtagcgccagcagtaaacataacgagcgactg
gagttcctaggggattccattctgagtttcgttattgccaatgcgctgtatcaccgtttt
ccccgcgtggacgaaggtgatatgagccggatgcgtgcaacgctagtgcgtggtaataca
ctggcggaaattgcccgagaattcgaattgggcgaatgcctgcgccttggtcctggtgaa
ttgaaaagtggtggcttccgccgtgagtcgattctggcggataccgtcgaagcgttaatc
ggcggtgtatttctggacagtaatatccagaccatcgagcggcttatcctgtcgtggtat
caaacccgactcgatgaaataagccctggagacaaacaaaaagatccgaaaacccgcctg
caggagttcctgcagggacgtcacttacctttaccgacctatctggtggtgcaggtacgt
ggcgaggcgcacgatcaggaatttacgattcattgccaggtcagcgggtttagcgagccg
gtagtgggtactgggtctagccgtcgtaaagccgaacaggcggcggcggaacaggccctg
aaaaagctggagcttgaatga

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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