KEGG T01305: Dda3937

Dickeya dadantii 3937: Dda3937_01002

Entry

Dda3937_01002 CDS T01305

Definition

Urea carboxylase

Orthology

K01941

urea carboxylase [EC:6.3.4.6]

Organism

ddd Dickeya dadantii 3937

Pathway

ddd00330	Arginine and proline metabolism
ddd01100	Metabolic pathways

Class

Metabolism; Amino acid metabolism; Arginine and proline metabolism [PATH:ddd00330]

SSDB

Motif

Pfam:

AHS2 CPSase_L_D2 AHS1 CPSase_L_chain Biotin_carb_C Biotin_lipoyl ATP-grasp_4 ATPgrasp_Ter Dala_Dala_lig_C Biotin_lipoyl_2 ATP-grasp RimK HlyD_3 RnfC_N HlyD ATP-grasp_3 GCV_H

Other DBs

NCBI-GI:

307133187

NCBI-GeneID:

9735948

UniProt:

E0SN96

Position

4779331..4782924

AA seq 1197 aa
MFERVLIANRGAIAVRIIRTLKKMGVKAIVVYAEADRHSLHVRQADEAWPLGDGPVRDTY
LNQDKLLHIAAQSGAQAIHPGYGFLSENAGFVTRCEQAGLVFLGPTVAQMTAFGLKHQAR
ALAQQNDVPLLPGSGLLTSLDSACEQAQRIGYPVMLKSTAGGGGIGMQRCNDEDQLADAF
TRVKRLAGNNFADDGVFLEKFIARARHIEVQVFGDGRGNVIALGERDCSAQRRNQKVIEE
TPAPNLGDSVRAELQATAIRLCQAVNYRSAGTVEYVYDESSKQFWFLEVNTRLQVEHGVT
EMVYGVDIVQWMVTLGAGCLPPLHTLAAAPRGHAIQVRLYAEDPAKQFQPCAGLLSNVSF
PQALPGLTLRIDHWLDSGNEVSPFYDPMLAKVLVHGTSRDAALDGMAQALDATSLYGIET
NLDWLRHLLTLPAVRCGDIITATLGSVVWQPATLDVLGGGTLTTVQDAPGRTGYWHVGVP
PSGPFDVRSFRLGNQLLGNAPDAAGLEITLRGPTLRFNRDCAFVITGAAIDARLDDVPLA
GWRTHHARAGQTLTLGDIQGAGCRSYLLLAGGLACPTYLGSRSTFTLGKFGGHAGRALRA
GDVLHLAAPALPVTDAVLPVPDWNSHWQLRVVYGPHGAPDYFTPEDIEAFFAADWQVHYN
SSRTGIRLIGPKPQWARTDGGEAGMHPSNIHDNAYAFGTVDFTGDMPVILGPDGPSLGGF
VCPATVIHADLWKLGQLKAGDSIRFMPVTLEQADELAREVECAISAVRPIVEPTLAACCP
SPVLYRRPAQNDRPSVTCLAAGDRFLLLEYGEHQLDIALRFRVHALMQWLERHPLPGVQE
LTPGIRSLQIHFDSLQCPRSVLLAHLQQADDALGNLQDAAVPSRTVWLPLSWDDDACREA
VARYTQSVRPGAPWCPSNIEFIRRINGLDSVDQVKDIVFSARYLVMGLGDVYLGAPVATP
LDPRHRLVTTKYNPARTWTAENSVGIGGAYLCVYGMEGPGGYQFIGRTLQMWNRDRQTDA
FRQPWLLRFFDQIRFYPVSAQELLAARERFPWGDYPLRTEEGEFRLADYQRNLVEQQPAI
DAFQQQRQRAFDEELARWRADGQFTFDSSLQETASDDEVIPANGYGVESQVAGSVWQWLA
APGDSVSAGQIVGILESMKMEIPITAPVAGIIHTLHRQPGHQVQAGQLLMVIEPAEH

NT seq 3594 nt +upstreamnt +downstreamnt
atgtttgagcgagtactgattgccaaccgtggcgctatcgcggtgcgtatcatccgcacc
ctgaaaaaaatgggcgtgaaagccatcgtcgtttacgccgaagcggatcgtcattcgctg
cacgtgcgtcaggccgacgaagcctggccgctgggcgacggcccggtgcgcgacacctac
ctgaatcaggacaaattactgcacattgccgcgcaaagcggcgcgcaggcgattcacccc
ggctatggttttctgagcgaaaacgccggctttgttacccgctgcgaacaggcgggcctg
gtctttctcggcccgaccgtggcgcagatgaccgctttcggcctcaagcatcaggcgcgc
gcgctggcgcagcagaatgacgtgccgctattgcccggcagcggcctgctcacctcgctg
gacagcgcctgcgaacaggcccagcgcattggttatccggtgatgttaaagagcaccgcg
ggcggcggcggcatcggcatgcagcgctgcaatgacgaagaccagttggccgatgccttt
acccgcgtgaaacggctggcgggcaacaacttcgccgacgacggcgtgtttctggaaaaa
ttcatcgcccgcgcccgccacatcgaagtgcaggtattcggcgacggccggggcaacgtc
attgcccttggcgagcgcgactgttccgcccagcgtcgcaaccagaaagtgattgaggaa
accccggcccccaaccttggcgacagcgtgcgcgccgaactacaggccaccgccatccgg
ctgtgtcaggcggtgaactaccgcagcgcaggcacggtagagtatgtgtacgacgaaagc
agcaagcagttctggttcctggaggtcaacacccgcctgcaggtggaacacggcgtgacc
gagatggtgtacggcgtcgacatcgtgcaatggatggtgacgctgggcgccggttgtctg
ccgccgctccacacgcttgccgccgcgccgcgcggccacgctattcaggtgcggctgtac
gccgaagacccggccaaacagttccagccgtgtgccgggttgctgagcaacgtcagcttt
ccgcaggcgctgcccggcctcaccctgcgcatcgaccactggctggacagcggcaacgag
gtctcgccattttatgacccgatgctggcgaaagtcctcgttcacggcaccagccgcgac
gccgcgctcgacggtatggcgcaagcgctagacgccacgtcgctgtacggcatcgaaacc
aatctcgactggttgcgccatctgctgaccctgcccgccgtcaggtgtggagacatcatc
accgcgacgctgggcagcgtcgtctggcagcccgcgacgctggatgtcctcggcggcggc
acgctcaccaccgtgcaggatgcgcccggccgcaccggctactggcatgtcggcgtgccg
ccttccggtccgttcgacgttcgctccttccggctcggcaaccagttgctgggcaacgcg
ccagacgccgccgggctggagatcaccctgcgcggcccgacgctgcgcttcaaccgcgac
tgcgcgttcgtcatcaccggcgccgccatcgacgcccggctggatgatgttccactcgcc
ggctggcggactcaccatgcccgcgccgggcaaacgctgacgcttggcgatattcagggt
gccggttgccgcagctacctgttgctggccggcggtctggcctgcccgacgtatctgggc
agccgcagcaccttcacgctcggcaaattcggcggccatgccgggcgggcgctgcgcgcc
ggcgacgtactgcatctggccgcccccgcgctgccggtcactgatgccgtcttgcccgtg
cctgactggaactctcactggcaattacgggtggtttacgggccgcacggcgcgccggac
tactttaccccagaggatatcgaggcgtttttcgccgccgactggcaggtgcattacaac
tccagccgcaccggcatccggctgattggcccgaaacctcagtgggcacgaaccgacggc
ggcgaagccggcatgcacccgtccaatatccatgacaacgcctacgccttcggcacggtg
gactttaccggcgatatgccggtcatcctggggccggacggcccgtcgctgggcgggttc
gtctgcccggccacggtgatccacgccgatttatggaaactcggccagttaaaagcaggc
gacagcattcgtttcatgccggtaacactggaacaggctgacgaactggcgcgcgaagtg
gaatgcgccatctccgccgttcgcccgatcgtggaaccgaccctcgccgcctgctgccca
tcgcccgtgctgtaccgccgaccggcgcaaaacgatcgaccatcggtgacctgcctcgcc
gcaggcgaccgtttcctgctgctggagtatggcgagcaccagttggatatcgccctgcgt
tttcgcgtgcacgcgctgatgcagtggctggaacggcatccgttgccgggcgtgcaggag
ctgacgccgggtatccgctcgctgcaaatccatttcgatagcctgcaatgcccgcgcagc
gtgctgctggcgcatctgcagcaagcggacgacgcgctcggcaatctgcaggatgccgcc
gttccctcccgcaccgtgtggctgccgctcagctgggacgacgacgcctgccgcgaggcc
gtcgcccgctatacccagtcggtcaggcccggcgccccctggtgccccagcaacatcgaa
ttcatccgtcgcatcaacgggctggattcagtggatcaggttaaagacatcgtgttcagc
gcccgctatctggtgatggggctgggagacgtctacctcggcgcaccggtcgccaccccg
ctcgacccgcgccaccggctggtcaccaccaagtacaacccggcccgcacctggacggcg
gaaaactcggttggcatcggcggcgcctatctgtgtgtatacggcatggaaggccccggc
ggctatcagttcatcggccgcacgttacagatgtggaaccgcgatcgacaaaccgacgcc
ttccgtcagccctggttgctgcggttcttcgatcagattcgcttttatccggtcagcgcg
caggagctgctggctgcccgcgagcgctttccgtggggagattacccattgcgtaccgaa
gaaggggagttccgcctcgccgactatcagcggaatctggtggagcagcaaccggcgatc
gacgctttccagcagcaacgccagcgggcatttgacgaggaactggcgcgctggcgcgcc
gacggccagttcaccttcgacagcagcctgcaagagacggccagcgacgatgaggtgatc
ccggctaacggttacggtgtggaaagtcaggtggcagggagcgtgtggcaatggcttgcc
gcccccggcgatagcgtcagcgccgggcaaatcgtcggtattctggagtcgatgaaaatg
gaaattcccatcaccgcaccggtcgcgggcattattcacacgctgcaccgtcaacccggt
catcaggtgcaagcggggcagttgctgatggtgatcgaaccggcggagcattaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (34)   

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