KEGG T01305: Dda3937

Dickeya dadantii 3937: Dda3937_03029

Entry

Dda3937_03029 CDS T01305

Gene name

rafA

Definition

alpha-galactosidase

Orthology

K07407

alpha-galactosidase [EC:3.2.1.22]

Organism

ddd Dickeya dadantii 3937

Pathway

ddd00052	Galactose metabolism
ddd00561	Glycerolipid metabolism
ddd00600	Sphingolipid metabolism

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:ddd00052]
Metabolism; Lipid metabolism; Glycerolipid metabolism [PATH:ddd00561]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:ddd00600]

SSDB

Motif

Pfam:

Melibiase Glyco_hydro_31 DUF4380

Other DBs

NCBI-GI:

307130406

NCBI-GeneID:

9733086

UniProt:

E0SII4

Position

1782196..1784325

AA seq 709 aa
METTLIRLASPATDVIVRCRPAAEILYWGPHLAAFSPQDADSLSRPVANGRLDVDVPVTL
AAETGRGLFGSPGIEGHRNGLDAFAVLTTVAVRQPDPQQLVIEAEDRQAGLRLTTELRLH
ADSGVLQLRHCLTNLHPGDWQVQRLAVTLPLPESAAEVMAFHGRWVREFQPHRTLLSHGS
LVQENRRGRTSHEYFPAMISGEPGFAEQHGRVWGAHLGWSGNHRLRTEVKTDGRRLLQAE
ALYLPGEIALAQGESLTTPWLYAACSEQGLNGMSQQFHRFLRQEIIRFPRAKARPVHLNT
WEGIYFKHDPDYIMQMASQAAALGVERFIIDDGWFRGRDHDRAALGDWYVDPRKYPQGLM
PVINHVRELGMEFGIWVEPEMINPDSDLYRAHPDWLLALPGYDQPTGRYQYVLDLSNPEV
FDYLLARLSWLLGGHPIDYVKWDMNRELVQPAHQGRAAADRQTQAFYRLLDVLGERFPQV
EFESCASGGGRIDYEVLRRCHRFWASDNNDALERQTIQRGMSYFFPPEVMGAHIGHHRCH
ATGRQHSIAFRGLTALFGHMGIELDPVRADAQEQAGFRHYVALHRRYRALLHTGCLWRVD
MPDATTQVQGVISADRGQALFLVAQLAMPDYALAGVLRFPGLDPQARYRLTVVDHPDLKP
VVDGGSTMRQLPAWMAAPAEYSSEWLMKAGLRLPILNPETALLLALERL

NT seq 2130 nt +upstreamnt +downstreamnt
atggaaacgacgctgattcgtctcgccagtccggcgacggatgtcattgtgcgctgccgg
ccggcagcggaaatactttactgggggccgcatctggcggcattttcgccgcaggatgcg
gacagcctgtcgcggccggtggcgaacggccggctggatgtggacgtgccggtgacgctg
gcggcggaaaccggacgcgggctgttcggctcgccgggcattgaggggcatcgcaacggt
ctcgatgcctttgcggtgctgaccaccgtcgcggtgcgtcagccggacccgcagcaactg
gtcatcgaggcggaagaccgtcaggctggcctgcgcctgaccaccgagttacggctgcat
gccgacagcggggtgctgcaactgcgccactgcctgaccaatctgcatccgggcgactgg
caggtgcagcggctggcggtcacgttaccgttaccggagtcggcggcggaggtgatggcg
tttcacggccgctgggtgcgggaatttcagccgcatcgcacgctgctgtcgcacggcagt
ctggtgcaggaaaaccgccgcgggcgcacgtcgcacgaatattttccggcgatgatcagc
ggggaaccgggatttgccgaacagcacggtcgggtgtggggcgcgcacctcggctggagc
ggcaaccaccggttgcgcacggaggtgaagaccgacggccggcggctgttgcaggcggag
gcgctttacctgcccggcgaaatcgcgctggcgcagggggagtcgctgaccacgccgtgg
ctgtacgccgcctgttctgaacaggggctgaacggcatgagccagcagtttcaccggttt
ctgcgtcaggagattatccgttttccgcgtgccaaggcgcgcccggttcacctcaatacc
tgggaaggcatctactttaagcatgacccggactacatcatgcagatggcgagccaggcg
gcggcgctgggcgtcgagcgctttattatcgacgatggctggtttcgcgggcgcgaccat
gaccgcgccgcgctgggcgactggtatgtggacccgcgcaagtacccgcaggggctgatg
ccggtgataaaccatgtgcgggagctgggcatggaattcggcatttgggtagaaccggaa
atgatcaacccggactccgacctctatcgcgcgcacccggactggctgctggcgctgccc
ggctacgaccagccgaccggccgctaccagtacgtgctcgacctgtctaaccccgaggtg
ttcgattatctactggcgcgcctgagctggctgttgggcgggcaccccatcgattacgtg
aaatgggacatgaaccgggagctggtgcagccggcccatcaggggcgggcggcggctgac
cgccagacgcaggcgttttaccgcctgctcgacgtgctgggcgagcgctttccgcaggtg
gagtttgagtcctgcgcatccggtggcgggcgcattgattatgaagtgttgcggcgttgc
caccgtttctgggcgtctgacaacaacgacgcgctggagcggcagacgattcagcgcggc
atgagctacttcttcccgcccgaagtgatgggggcgcacatcggccatcaccgctgtcac
gccaccggacgccagcacagtattgcctttcgcgggttgacggcgctgttcggtcatatg
ggtatcgagctggatccggtgcgcgccgatgcgcaggaacaggccggttttcgccattat
gtggcgttgcatcggcgttaccgcgcgctgttgcacaccggttgcctgtggcgggtcgac
atgccggacgccaccacccaggtgcagggggtgatcagtgccgatcgggggcaggcgctg
tttctggtagcgcagttggcgatgccggattacgcgctggccggggtgctgcgattcccc
ggtctggacccgcaggcccgttaccggttgaccgtggtggatcatcccgacctgaagccg
gttgtcgacggcggcagcaccatgcgccagctgccggcatggatggcggcaccggctgaa
tacagcagcgaatggctgatgaaagccgggctgcgtctgcccattctcaacccggaaacg
gcgctgttgctggcgttagaacgtctgtaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (20)   
   KEGG COMPOUND (20)   
Chemical reaction (13)   
   KEGG ENZYME (1)   
   KEGG REACTION (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (46)   

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