KEGG   Desulfovibrio alaskensis: Dde_2334Help
Entry
Dde_2334          CDS       T00294                                 

Definition
(GenBank) Succinyl-CoA synthetase, alpha/beta subunit (sucCD)
  KO
K01902  succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Organism
dde  Desulfovibrio alaskensis
Pathway
dde00020  Citrate cycle (TCA cycle)
dde00640  Propanoate metabolism
dde00660  C5-Branched dibasic acid metabolism
dde01100  Metabolic pathways
dde01110  Biosynthesis of secondary metabolites
dde01120  Microbial metabolism in diverse environments
dde01130  Biosynthesis of antibiotics
dde01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:dde00001]
 Metabolism
  Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    Dde_2334
   00640 Propanoate metabolism
    Dde_2334
   00660 C5-Branched dibasic acid metabolism
    Dde_2334
Enzymes [BR:dde01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     Dde_2334
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: ATP-grasp_2 Ligase_CoA CoA_binding Succ_CoA_lig CoA_binding_2 DUF1887
Motif
Other DBs
NCBI-ProteinID: ABB39131
JGI: Dde_2334
UniProt: Q30YW5
Position
complement(2351569..2353671)
Genome map
AA seq 700 aa AA seqDB search
MFLNEHMSKVLFAEAGIDTPAGDLLTPGQLAEYTPAVSAPWFLKAQVLTGGRGKAGGIRR
AATLKELRETAQDMFTMEIKGHRVPFLRIESATDIRRECYLSFVLSRERRDLLLTTSRAG
GIHVESSTGQQKPLVQRVPLDSGLREHHLRAAFFEMGVEKEHWAGFKAMAEKLYRAVREY
GLLLAEINPLVLTCDGRWVALDGKVELDDSVVDLQPDLERFYTPEHHSREENLAREAGLS
YVELKGWVGILVNGAGLAMATMDLLNFSGLSAANFMDLGGAADASRMRRALDLLFENRNV
RAVFINLFGGIVSCADVARALVDALEGGDAPKPIVVRMAGHESAEGRALLHDFAHPSVTI
AQEMHEALDALRSMKPADVPRIEFPLPQEPDPVPQHNGQEAAACVPVYNGMGLDSSSGVL
VQGLTGRVAQRHAALMMEYGTRVVAGVTPFKGGQEVMGIPVYDSVHEACRHHRIDASIIF
VPAAFAPDAVLEAAAEEIPWVVCITEGIPQAAMLSALKNIQPSPTCVVGPNTPGIVVPHQ
LKIGIMPGYVFSPGPVAVFSRSGTLTYEAASRLSAAGIGQSVCVGVGGDSFVGTGFVDLC
ERVRHDAATRAVLVLGEVGGRAEEELAEYVRRTGFSKPVVSFVAARTAPPGRRLGHAGAI
LDETTGGVEAKLQAMREAGFTICPDLASLPRIMRAVLDRA
NT seq 2103 nt NT seq  +upstreamnt  +downstreamnt
atgtttctgaatgagcatatgagcaaggtgctgtttgccgaagccggaatagatacccct
gcgggcgacttgctgacgcccggtcagctggcggaatatactcctgccgtgtccgccccg
tggtttctcaaggcgcaggtgcttaccggcggaagaggcaaggccggaggcatacgccgt
gccgccaccctgaaggagctcagagagacggctcaggacatgttcaccatggaaatcaaa
ggacacagggtgccctttctgcgtatcgaatccgccacggacatacgcagggaatgctat
ctttcttttgtactttcgcgcgaacggcgtgacctgctgcttaccaccagcagagcgggc
ggtattcatgtggagagttccaccggtcagcagaagccgcttgtgcagcgggttccgctg
gacagcggcctgcgcgagcatcatctgcgtgcggctttttttgaaatgggagttgaaaag
gagcactgggccggtttcaaggccatggcggaaaaactgtacagggcggtaagagagtac
ggtctgctgctggccgagatcaaccctctggtgcttacctgcgacggccgctgggtggca
ctggacggcaaggttgagctggacgacagtgtggtggacctgcagcccgatctcgaacgg
ttctatacgccggaacatcattcgcgtgaagagaatctggcccgcgaagccggactcagc
tatgtggagcttaaaggctgggtggggattctggtcaacggggccggactggccatggcc
acaatggaccttcttaatttttccggtctgtcggcggcaaacttcatggatctgggcggt
gcggccgatgcgtcgcgtatgcgccgcgcacttgatctgctgtttgaaaaccgcaatgtg
cgcgcggtgttcatcaacctgttcgggggtattgtttcgtgcgccgatgtggcccgcgcg
cttgtggacgcactggagggcggtgatgcgccaaagcccattgtggtgcgtatggcaggc
cacgaatccgcagaagggcgggcgctgctgcatgactttgctcatccttcggtaaccata
gcacaggaaatgcacgaagcgctggacgcgctgcggtccatgaaacccgcagatgtcccc
cgtattgaatttccgttgccgcaggaacctgatccggtgccgcagcataacgggcaggaa
gctgccgcctgtgtgccggtgtataacggcatggggctggacagcagctccggcgtgctg
gtgcaggggctcacaggccgcgttgcccagcggcatgccgccttgatgatggaatacggc
acgcgggttgtggcgggggtcactccctttaaaggcgggcaggaggtgatggggattccg
gtgtatgattccgtgcatgaggcgtgcaggcatcaccgtattgatgcttccatcattttt
gtaccggccgcatttgcccccgatgccgtgctggaggccgcagcggaagaaattccgtgg
gttgtgtgcattactgaaggaatacctcaggcggccatgctgtcggctctgaaaaatatc
cagccgtcgcccacttgtgtggtggggccgaatactccgggcatagtggttccgcatcag
cttaaaataggtatcatgccgggttatgtgttcagccccggccctgtggcggtgttttcg
cgttcgggcacgcttacctatgaggcagcttcgcgcctttccgctgcgggcatagggcaa
tccgtatgcgtgggggtgggcggagattcgtttgtgggcaccggctttgtggacctgtgc
gaaagagtgcgccacgatgccgccacccgtgcggtgctggtgctgggcgaagtgggcggc
agggccgaagaggaactggcagaatacgtacgcaggacaggtttttccaaaccggtggtt
tcatttgtggcggcgcgtactgctcctcccggccgcaggctggggcatgccggagccatt
ctggacgaaaccaccggcggagtggaggctaaactgcaggccatgcgcgaggccggtttt
accatctgccctgatctggcaagtctgccgcgcattatgcgcgctgttcttgacagggca
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (8)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (33)   

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