KEGG   Desulfitobacterium dehalogenans: Desde_3391
Entry
Desde_3391        CDS       T02146                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
ddh  Desulfitobacterium dehalogenans
Brite
KEGG Orthology (KO) [BR:ddh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ddh03009]
    Desde_3391
Enzymes [BR:ddh01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     Desde_3391
Ribosome biogenesis [BR:ddh03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Desde_3391
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AFM01677
UniProt: I4ACJ2
Position
complement(3385883..3386917)
AA seq 344 aa
MKKMGIEQGITMEWEGLNTGLDAEELELELEIQDRDDQESEPKMEFELAEGTRLDVGVTE
VVGKSRSFIQGLIEDGHVLVNGASKKSNYKVRTKDKITVVLPPPKELQVEAEDIPLEILY
EDEDVLVVNKPQGMVVHPAPGAWTKTLVNALLYHCRNLSGINGVLRPGIVHRIDKDTSGL
LVVAKNDLAHQGLAEQIKAHSMARRYLAIVHGVVFEPSGTVEAPIGRDPADRKKMAVVFQ
NAKEAVTHYKVLERFRDFTLIEARLETGRTHQIRVHMAYLKHPVLGDPLYGPRKNPFGLQ
GQMLHAQLLGFQHPRTGEYMEFSAPPSELLQKVLEGIRRDGLIS
NT seq 1035 nt   +upstreamnt  +downstreamnt
ttgaaaaaaatggggatagaacaggggataactatggagtgggaagggttaaatactgga
ttggacgctgaagaactggaactggagttagagatccaggatagggatgaccaggaatcg
gaaccaaagatggagtttgagcttgccgaaggaacccgcttggatgtgggggttacggaa
gtggtgggtaaaagccgctcttttatccagggattaatcgaggatggccatgtcttggtc
aatggggcctccaaaaagtccaattataaggtacggacaaaggataagattacggtggtc
cttcctcctcccaaagaattgcaggtggaagcagaggatattcctctggaaatcctctat
gaagatgaggatgtattggtcgtgaacaaaccccaggggatggtggttcatccggcgccg
ggggcatggaccaagaccttggtgaatgccctgctttaccattgccggaatctctccgga
atcaatggagtattgcgccctgggattgtccatcgtattgacaaggatacctctgggctt
ttggtcgtggcaaaaaatgacttggcccatcaaggattagctgagcagatcaaagcccac
agtatggcccgccggtatctggccattgttcacggagtcgtgttcgagccctcgggaacg
gtggaagctccaatcggcagagatcctgccgatcgcaaaaagatggcggtggtttttcag
aatgccaaagaggctgtgacccattataaagtcctggagaggttccgggattttaccctg
attgaagcccggctggaaacagggaggacccaccagattcgggttcatatggcctatctt
aagcatcccgttctgggagatcctctttacgggccccggaagaacccttttggcttacag
ggtcagatgctccatgcccaacttttagggtttcagcatccgcgaaccggggaatatatg
gagttcagtgctcctccttccgagctgctccaaaaggttttggaggggattcgcagggat
ggccttatttcttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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