KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0267604
Entry
DDB_G0267604      CDS       T00245                                 
Symbol
mserS
Name
(RefSeq) serine-tRNA ligase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    DDB_G0267604 (mserS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ddi01007]
    DDB_G0267604 (mserS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ddi03016]
    DDB_G0267604 (mserS)
Enzymes [BR:ddi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     DDB_G0267604 (mserS)
Amino acid related enzymes [BR:ddi01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   DDB_G0267604 (mserS)
Transfer RNA biogenesis [BR:ddi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    DDB_G0267604 (mserS)
 Prokaryotic type
    DDB_G0267604 (mserS)
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N
Other DBs
NCBI-GeneID: 8615961
NCBI-ProteinID: XP_647158
dictyBase: DDB_G0267604
UniProt: Q55GM6
Position
1:complement(406648..408225)
AA seq 525 aa
MLKLFKNFNQCNNKLNLNSNLLKYYTSKIKQIDQNEINQQQQQQHIIVNQIKPRIDFQFI
KDNENQIKENIIKRKSPVELEKLIKNYDEYRIIKKELDTFRAKRNEIASKMKLMMKGGGE
SNKNDRLELVEQGKQVKEDLIALEEKHDIYFNEITSEALKIPNNTHPSVPIGAESNANII
KMVGEKPNYLKPDEPIKDHLELGESLGVIRSASKTTGHKYYYFTREGAMLEMALSYWAFS
KLTYKYGFQSVITPDLIHPNLAEACGFHARSDADQLFWIKDRDLCLSATSEIPLAGMYAN
EEPLQSAELPIKMVGYSHCFRPEAGRGLQNKGIYRVHQFSKVEMFIISKPHESNEILEEL
LKIQIELFSELGLHFRVLDMPSEDLGAPAYRKYDIEVWIPSKQEYGEISSASNCTDYQSK
RLNIKYQSTKDDFQIQQFVENNYKIIPSPQILNDDNNNNSNNNNEIDNSIPPLFTHTLNG
TACAIPRLILAILENNQQSDGSVLIPKVLQPFMNNQKVILPLNKK
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgttaaaattatttaaaaattttaatcaatgtaataataaattaaatttaaattcaaat
ttattaaaatattatacaagtaaaattaagcaaattgaccaaaatgaaattaatcaacaa
caacagcaacaacatattattgttaatcaaattaaaccaagaattgattttcaatttata
aaagataatgaaaatcaaattaaagaaaatattataaaaagaaaatcaccagttgaatta
gagaaattaattaaaaattatgatgaatatagaattataaagaaagaattggatacattt
agagcaaaaagaaatgaaattgcatcaaagatgaaattaatgatgaaaggtggtggtgaa
agtaataaaaatgatagattggaattagttgaacaaggtaaacaagtgaaagaggattta
atagcattggaagagaaacatgatatatacttcaatgagatcacaagtgaagctttgaaa
ataccaaataatacacacccatcagtgccaataggagcagaatccaatgcaaacattatt
aaaatggttggtgagaaaccaaattatttaaaaccagatgaaccaattaaagatcattta
gagttgggtgagagtttaggagtgattcgatcggcttcaaagaccaccggtcataaatac
tactatttcacaagggagggtgccatgctggaaatggcgttgtcctattgggcattttct
aaactaacttataaatacggatttcagtctgtgataacaccagatttgattcacccaaat
ttggcagaagcttgtgggtttcatgcacgttcagatgctgaccaattgttttggattaag
gatagggatctttgcctatcggcaacttctgaaatcccattagcgggtatgtacgccaat
gaggagccattgcaatctgcagagttgcctattaaaatggtgggctattcacactgtttc
agacccgaggctggcagaggcttgcaaaataagggcatctatagggtacaccagtttagt
aaggttgagatgtttatcatttcaaaaccacacgaatctaatgagattcttgaggaactt
ttaaaaattcaaattgaattattcagtgaattaggtctacatttcagagtgctagatatg
ccatctgaagatttaggtgcaccagcatacagaaaatatgatatagaagtttggatacct
tcaaaacaagaatatggtgaaatcagcagtgcttcaaattgcaccgattatcaaagtaaa
agattaaatataaaatatcaatcaacaaaagatgatttccaaattcaacaatttgttgaa
aataattataaaattattccatcaccacaaattttaaatgatgataataataataatagt
aataataataatgaaattgataattcaataccaccattattcactcatactttaaatggt
acagcttgtgctataccacgtttaattttagccattttagaaaataatcaacaatctgat
ggttcagttttaattccaaaagttttacaaccatttatgaataatcaaaaagttattctc
cctttaaataaaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (44)   

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