KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0273583
Entry
DDB_G0273583      CDS       T00245                                 
Symbol
gtf2e1-2
Name
(RefSeq) transcription factor IIE
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DDB_G0273583 (gtf2e1-2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ddi03021]
    DDB_G0273583 (gtf2e1-2)
Transcription machinery [BR:ddi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     DDB_G0273583 (gtf2e1-2)
 Prokaryotic type
  Archaeal type
    TFE
     DDB_G0273583 (gtf2e1-2)
SSDB
Motif
Pfam: TFIIE_alpha Rrf2 HTH_25 HrcA_DNA-bdg
Other DBs
NCBI-GeneID: 8619006
NCBI-ProteinID: XP_002649185
dictyBase: DDB_G0273583
UniProt: Q557M8
Position
2:complement(3051445..3053533)
AA seq 456 aa
MSSSNNIYHILDDLVKMVIRAFYPDEYAVIIDGLLREKKRIKDEDLALRLRIQQKYVRKI
LMDLKGDSMVKSSDVKVEAKGPNERGSTHLLWYIDYKHIIDIVKYKLYMFRKKMESVKVQ
KIDVQTYKCQTCHKVYTALDIPKLLNMDTGALACEICDGELEEELNNESLTQTAKHQSDL
FSQLRKIIEQLKKTEGHNIPLFARDLADLSADQGPSYTINTNSSLGMGPKPSAFPVAQGA
ATSHHIDPTNENIEFHVDILDTDGIEINKAVVKKENKKTGLASLPPWLLPSNSFKNRNVK
SNSILNNNQQTQTSTNEQPTAVKEQIKIDQDFYINYIKTHYQEWESAPDSGDADGNGSNS
GSGGSTIEGNDGGNGEHQNKKMKLDDSQTVSSMSQSDDDGKDILVRVGDNLIPITKITEH
DQELMSNQEYEDYSHALYSYASKNVFDHQYQSLMSN
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgtcatcttcaaacaatatctatcatattttagatgatcttgtaaagatggtaattcgt
gctttttaccccgatgaatatgctgttattattgatggtcttttaagagaaaagaaacgt
attaaagatgaagatttagcattaagacttcgtattcaacaaaaatatgtaagaaagata
ttaatggatcttaaaggtgattcaatggtaaagagttcagatgtaaaagtagaagcaaaa
ggaccaaatgaaagaggtagtacccatctactttggtatatagattataaacatatcatt
gatattgtaaaatataaattatacatgtttagaaagaagatggaatctgtaaaagttcaa
aaaattgacgttcaaacttataaatgtcaaacatgtcataaagtatatacagcattagat
attccaaaattattaaatatggacactggtgcattggcatgcgaaatttgcgatggcgaa
ttagaagaggaattaaataatgaatcattaacacaaactgctaaacatcaatctgatttg
tttagtcaattaagaaaaattattgaacaattaaagaaaactgaaggtcataatatacct
ttatttgcaagagatttagcagatttatcagcagatcaaggtccatcttatacaattaat
accaattcatcattaggtatgggtccaaaaccatctgcatttcctgttgcacaaggtgct
gcaacttctcatcatatagatccaacaaatgaaaatatagaatttcatgttgatatttta
gatactgatggtatagaaattaataaagcagtagttaaaaaagaaaataaaaaaacagga
ttagcatcacttccaccttggttattgccaagtaattcatttaaaaatagaaatgttaag
tcgaattcaatcttgaacaataatcaacaaactcaaacctcaaccaacgaacaacctact
gctgttaaagaacaaattaaaattgatcaagatttttatataaattatattaaaactcat
tatcaagaatgggagagtgctcctgatagtggtgatgctgatggtaatggtagtaatagt
ggtagtggtggttcaaccattgaaggtaatgatggtggtaatggtgaacatcaaaataaa
aaaatgaaattggatgattcacaaaccgtttcttcaatgtcacaatcggatgatgatggt
aaagatattttagttagagtcggtgataacttaataccaatcaccaaaatcacagaacat
gaccaagagttaatgtctaatcaagaatatgaagattatagtcatgcactctattcatat
gcttccaaaaatgttttcgatcatcaatatcaaagtttaatgtcaaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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