KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0281437
Entry
DDB_G0281437      CDS       T00245                                 
Symbol
lysS
Name
(RefSeq) lysine-tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    DDB_G0281437 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ddi01007]
    DDB_G0281437 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ddi03016]
    DDB_G0281437 (lysS)
Enzymes [BR:ddi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     DDB_G0281437 (lysS)
Amino acid related enzymes [BR:ddi01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   DDB_G0281437 (lysS)
Transfer RNA biogenesis [BR:ddi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    DDB_G0281437 (lysS)
 Prokaryotic type
   Other AARSs
    DDB_G0281437 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-GeneID: 8623061
NCBI-ProteinID: XP_640677
dictyBase: DDB_G0281437
UniProt: Q54TY4
Position
3:complement(4498697..4500739)
AA seq 551 aa
MTTPAPAPAKQPAKQAPAKKNDEEDFDPSMYKENRTKQLTSADIGVNPWPHKFEVSHQLP
KFVEEFSVLEKDGEPSTQVVSIAGRVLSKRAAGSGLVFYDITGEFNKVQVLVNKRAYASC
EEDYVKINGLLRRGDIIGAKGTPGRSKTGELSLFATEVILLSPCLHMLPKAASGLTDPET
RFRQRYLDMICNESVKKNFIIRSKVIQGVRRYLDNLGFIEVETPMMNMIAGGAAAKPFLT
HHNALNMDLFMRIAPELYLKQLVVGGMDRVYEIGKQFRNEDIDHTHNPEFTTCEFYMAYA
DYNDLYTMTEQLLQSIVMSIHGSLKIKYHPDGPSGKEIEIDFSSPWRKIDMIADLEAIIG
EKIPTPYTSEECREFLVKTCRERKVECSAPQTTARLLDKLVGEYLEVQCINPTFIINHPE
IMSPLSKYHREKPQLTERFELFVNTKEICNAYTELNNPFVQIERFAEQAKAKAAGDDESM
LIDKVFTTSLEYGLPPTGGFGLGIDRFAMLMSDTYNIKEVILFPAMKPEQVSKPVTTTTA
APTTTEAPKSN
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgacaactccagctccagctccagccaaacaaccagctaaacaagcaccagccaaaaag
aatgatgaagaagatttcgatccatcaatgtataaagaaaatcgtactaaacaattaaca
agtgctgatattggtgttaacccatggccacataaatttgaagtttcacatcaattacca
aaatttgttgaagaattttcagttcttgaaaaagatggtgaaccatcaactcaagttgta
tcaattgcaggtcgtgttttaagtaagagagcagcaggatcaggtttagttttctacgat
atcactggtgagttcaacaaagtacaagttttagttaacaaacgtgcatacgcatcatgt
gaagaagattacgttaaaatcaatggtctcttaagacgtggtgatattattggtgccaaa
ggtacaccaggtcgttcaaagactggtgaactttcattatttgccacagaggttatttta
ttatcaccatgtttacatatgttaccaaaggcagcctcaggtttaacagacccagaaacc
agattcagacaacgttatttggatatgatttgcaatgaaagtgtaaagaagaactttatc
attcgttcaaaggttattcaaggtgtaagacgttatctcgacaatttaggtttcattgaa
gtcgaaacaccaatgatgaatatgatcgcaggtggtgccgccgctaaaccattccttacc
catcacaacgccctcaacatggatctctttatgagaattgcaccagaactctaccttaaa
caattggttgtcggtggtatggatcgtgtctatgaaattggtaaacaattcagaaatgaa
gatatcgatcacacccataacccagagttcaccacttgcgagttctatatggcatacgct
gattataatgatctctacaccatgaccgaacaattactccaatccatcgtaatgagtatc
catggttccctcaaaattaaatatcacccagatggtccatcaggtaaggaaatcgaaatc
gatttctcttcaccatggagaaagatcgatatgattgccgatttggaagcaatcattggt
gaaaagattccaaccccatacaccagtgaagaatgtcgtgaatttttagttaaaacctgt
cgtgaacgtaaagttgaatgctctgctccacaaactaccgctcgtttattagataaactt
gttggtgaatatttagaagtacaatgtatcaatccaaccttcatcatcaatcatccagaa
attatgtcaccactctccaaatatcacagagagaaaccacaattaactgaacgtttcgaa
ctctttgtcaacaccaaagaaatctgtaatgcttacaccgaattaaataatccattcgtt
caaatcgaacgtttcgctgaacaagctaaagctaaagctgccggtgatgatgaatctatg
cttatcgataaagttttcactacctcactcgaatatggtcttccaccaactggtggtttc
ggtcttggtatcgatcgtttcgctatgttaatgtctgatacttataacattaaagaagtt
attcttttcccagctatgaaaccagaacaagtctccaaaccagtcactaccaccactgct
gccccaactaccactgaagctccaaaatcaaattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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