KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0282243
Entry
DDB_G0282243      CDS       T00245                                 
Symbol
nhp2l1
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein
  KO
K12845  U4/U6 small nuclear ribonucleoprotein SNU13
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03008  Ribosome biogenesis in eukaryotes
ddi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DDB_G0282243 (nhp2l1)
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    DDB_G0282243 (nhp2l1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ddi03041]
    DDB_G0282243 (nhp2l1)
   03009 Ribosome biogenesis [BR:ddi03009]
    DDB_G0282243 (nhp2l1)
Spliceosome [BR:ddi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    DDB_G0282243 (nhp2l1)
Ribosome biogenesis [BR:ddi03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    DDB_G0282243 (nhp2l1)
SSDB
Motif
Pfam: Ribosomal_L7Ae RNase_P_pop3 PELOTA_1 K1377
Other DBs
NCBI-GeneID: 8623481
NCBI-ProteinID: XP_640305
dictyBase: DDB_G0282243
UniProt: Q54ST0
Position
3:5564223..5564709
AA seq 129 aa
MADSSNNEKAKPLADSKLTLTILDLIQQSNNLGQLKKGANECTKAVSRSTAEFVVLAADA
EPLEILLHIPLLCEDKNIPYVFVSSKSELGRACDVSRPVVACAVTVDDKSQLKSQITNVK
DSLDRLWIV
NT seq 390 nt   +upstreamnt  +downstreamnt
atggccgattcttcaaataacgaaaaagctaaaccattagctgatagcaaacttactctt
accattttggatcttattcaacaatcaaacaatttaggccaattaaagaaaggtgctaac
gaatgtaccaaagccgtttcacgtagtactgctgaatttgttgttttagccgctgatgct
gaaccattagaaattttattacacattccattattatgtgaagataagaatattccatac
gttttcgtttcaagcaaatccgaactcggtagagcttgtgatgtttcaagaccagttgtt
gcttgtgctgttactgtcgatgataagagtcaattgaaatctcaaatcactaacgttaaa
gattcattagacagattatggatcgtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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