KEGG T00245: DDB

Dictyostelium discoideum (cellular slime mold): DDB_G0282539

Entry

DDB_G0282539 CDS T00245

Gene name

nagB

Definition

glycoside hydrolase family 20 protein

Orthology

K12373

hexosaminidase [EC:3.2.1.52]

Organism

ddi Dictyostelium discoideum (cellular slime mold)

Pathway

ddi00511	Other glycan degradation
ddi00520	Amino sugar and nucleotide sugar metabolism
ddi00531	Glycosaminoglycan degradation
ddi00604	Glycosphingolipid biosynthesis - ganglio series
ddi01100	Metabolic pathways
ddi01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:ddi00520]
Metabolism; Glycan biosynthesis and metabolism; Glycosaminoglycan degradation [PATH:ddi00531]
Metabolism; Glycan biosynthesis and metabolism; Glycosphingolipid biosynthesis - globo series
Metabolism; Glycan biosynthesis and metabolism; Glycosphingolipid biosynthesis - ganglio series [PATH:ddi00604]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:ddi00511]

SSDB

Motif

Pfam:

Glyco_hydro_20 Glycohydro_20b2 Glyco_hydro_20b Peptidase_M85 WH1

Other DBs

NCBI-GI:

NCBI-GeneID:

DictyBase:

UniProt:

Position

AA seq 541 aa
MINKFLTIFLIFSIVIIKVLSQSSNEQPLNVVPYPQEVTMIGCNIPLSVGSISIKSNIES
TILSISISRYQSLFFPFVSNNVLKDSSSNIELSLIIASDDETLELGIDESYFLLVNQDTY
QIKANTIYGAMRGLETFKQMVVYDVVENSYSLTCAEVVDYPTYQWRGLLVDNARHFLPKN
MVLHIIDSMGYNKFNTMHWHLIDTVAFPVESKTYPKLTEALLGPGAIITHDDILEVVAYA
KTYGIRVIPEFDVPGHSASWGVGYPELLSNCPGYPQSSIPLDCSNPYTYSFLENFFSEIA
PLFQDSYFHTGGDELVIDCWANDTSIQKWMKTNNYNTSDAFQYFEDQLDVILKSINRTKI
AWNDVLQHGVKFDKETTLVQTWTNINDLRDVLAAGYKTITSFFFYLDRQSPTGNHYHYEW
QDTWEDFYASDPRLNITSNAENILGGEATMFGEQVSTVNWDARVWPRAIGISERLWSATE
INNITLALPRIGQFSCDMSRRGISSGPLFPDFCSLPDDLSFSFKPVYQLSKDEIKLILKK
K

NT seq 1626 nt +upstreamnt +downstreamnt
atgataaataaatttttaacaatttttttaatattttcaattgtaataattaaagtttta
tcacaatcatcaaatgaacaaccattaaatgtagtaccatatccacaagaagttacaatg
attggttgtaatattccattatcagtaggatcaatatcaattaaaagtaatattgaatca
acaatattaagtatttcaatttcaagatatcagagtttatttttcccatttgtttcaaat
aatgttttaaaagatagctcttcaaatatcgagttatcattaattattgcaagtgatgat
gaaacacttgaattgggtattgatgaaagttactttttattagtgaatcaagacacttat
caaataaaagccaatacaatctatggtgcaatgagaggtttagaaacattcaaacaaatg
gtagtttatgatgttgtagaaaatagttactcattgacatgtgctgaagttgtagactat
ccaacctatcaatggagaggattgttggttgataatgcccgtcatttccttccaaagaat
atggtacttcatattattgactcgatgggttataataaattcaatactatgcattggcat
ttaatagatactgttgcattcccagtggaatcgaaaacctatccaaagttaactgaagca
ttacttggacctggtgcaattattacacatgatgatattttagaggtggttgcctatgct
aaaacctatggaattcgtgtgattcctgaatttgatgttccaggccattctgcatcatgg
ggtgtaggctatccagagctgttatccaattgtccaggctatccacaaagttcaattcca
ttagattgttcaaatccatacacttatagttttcttgaaaactttttctcagagattgca
cctctattccaagatagttatttccatactggtggtgatgaattggtaattgattgttgg
gccaatgatacttcaattcaaaaatggatgaaaactaataactataatacttctgatgct
tttcaatattttgaagatcaattagatgtaattttgaaatcaattaatcgtactaaaatc
gcctggaatgatgtacttcaacatggtgttaaatttgataaagaaactactttggttcaa
acttggacaaatattaatgatctaagagatgtactagccgctggttataaaactataaca
tcgttctttttctatttagatagacaatcaccaactggaaatcattatcattatgaatgg
caagatacttgggaagatttctatgcatcagatccaagattaaatattacttcaaatgct
gaaaatattttaggtggtgaagctactatgtttggtgaacaagttagtaccgtcaattgg
gatgccagagtttggccaagagctattggtatctctgaaagattatggtctgctactgaa
attaataatatcactcttgctctccctcgtattggccaattctcttgtgatatgtctcgt
cgtggtatttcctctggtccattattccctgatttttgctcattacctgatgatttatct
ttttcttttaaaccagtttatcaattatcaaaagatgaaattaaattaattttaaaaaaa
aaataa

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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