KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0283189
Entry
DDB_G0283189      CDS       T00245                                 
Name
(RefSeq) hypothetical protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03030  DNA replication
ddi03410  Base excision repair
ddi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DDB_G0283189
   03410 Base excision repair
    DDB_G0283189
   03420 Nucleotide excision repair
    DDB_G0283189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ddi03032]
    DDB_G0283189
   03400 DNA repair and recombination proteins [BR:ddi03400]
    DDB_G0283189
Enzymes [BR:ddi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DDB_G0283189
DNA replication proteins [BR:ddi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    DDB_G0283189
DNA repair and recombination proteins [BR:ddi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      DDB_G0283189
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B RNase_H_2 DNA_pol_B_exo2 DUF4384
Other DBs
NCBI-GeneID: 8623984
NCBI-ProteinID: XP_639211
dictyBase: DDB_G0283189
UniProt: Q54RD4
Position
4:complement(385928..393596)
AA seq 2380 aa
MSQKWNENKKNKDEKDENDKYVGFKNYEKEGWLLNMQPGSSKDGLDIEKASLELFFIQDD
ATSFRVWIPYNPYFYIYVKEGHQSEVESYLKSTYEKDIAGIDIMDKEDLDLENHLSGLKR
KYLKIRFHNVSTLLSVRNDLFPIIKRNKQKSNTSEAYEDESLNKILNSYYNKGNNNNNNH
QNYNNNNNQNNNNFNKELNKDDNNNNNSKLNKQATEYILDIREYDVPYYVRAAIDLNIRV
GLWYTVIKNGRLTTVNELTTRVDRPDPKVLAYDIETTKLPLKFPDSSIDSIMMISYMLDK
QGYLIVNREIVSEDIKDFEYTPKPEYYGPFTVFNEPDEKSVLERFFSEIKREKPHIFVSY
NGDMFDWPFVESRAEYHGLSMFHQIGFRNDNGEYRSKINPHMDAFCWVKRDSYLPHGSHG
LKAVTREKLRYDPLELDPELMLKSAQEDPETLANYSVSDAVATYYLYMNYVHPFIFSLCT
IIPMNPDDVLRKGSGTLCEALLMTQAFKADVIFPNKHKDDINSMYKGHLLESETYVGGHV
ECLESGVFRSDIPTNFSLDPASIEKHMGNIDQVLKFALKEGGIPLDTVSNYQEVKEDVLK
KFTLLKENPKQQSHPLIYHLDVSAMYPNIILTNKLQPTAVVNDEVCATCVYNKPESQCQR
TLDWQWRGDYSPSNQSEYRLILQQLESEKFGDGDERKSFLSLSEEKRNELLRKRLKEYSR
KVYRKTHQITQEIRSDTICMRENSFYVDTVRLFRDRRYVFKNHHRDWKIKYDQAMQESGG
TNSVAVVAAQGMVVLYESLQLAHKCILNSFYGYVMRKGARWYSMQMAGIVTHTGSNIIKE
AREVVEQMGRPLEIDTDGIWCILPSHFPENYTLKSASTGKKVTFSYICEMLNEKVAKSFT
NHQYQDYNAETNTYTIRDECSILFECDGPYRCMLIPTSKEKDVKLKKRYAVFNREGRICE
LKGFEIKRRGELKLIKLFQSEVFKEFLGGDSLEGCYQSVGAVANRWLDILDSHAENYEEK
DLIELITESSNMSRKLEEYGTQKSSAISTAKKLAEFLGDDMIKDKGLSCQYIISNKPAGS
PITERALPVAIFDADFETRCHYLRRWTKSPSGDLDIRELIDWDYYRQRLSGVIQKIITIP
AALQNVTNPVPRVIHPDWILKEIRRNEDGRQQTSITSFFEKTEDNDQDNDNDNDNDNDND
NDNSKPQQTDDIENMFSSRFKDLPAFNPKVTKFKRSKQSSSDVSSLLIKKSKSSIETFTN
EQEKQIMETKTPSIDKDFQGWLSISKKKWKIQRLLKKRRQRLGGSLFDSDSFRIGSKLTN
RESSSSSFFKSQSDIIKKGYWNIISIEPIYGGEPGIYQMWSLIEDQLIPIKVDIGRVFYL
NSIDTDPYEDAQKNTNVIPPRGKQRFNVFSVTMSESQFLEQSKELNTLFTNPMIEGVYET
KVPLDIKAIIQCGCVATLSRVSPFFTKIVNSNTRFSLEDIASKPDKQFHYLAEHNFNQLF
LYHNSRDGKDGYFVLFNMNTQQCSVIFSNPYMAANKIDARVLNSIKEKLPEITFTMDQKS
SMSLAKKEIGSLIMEYQRKGLPTIILLQVPNAIGILEQIPILREFPRVPVPYHDNDSMYS
PFNWDVHSLKPLPLRLMDAPKLWVYYANMSRYANIPIGNIPTDNASFMCDILYARSLVEQ
KHLLWMSDSNFPDLGGSEEDDAKFYEELNNVEINNSDCYNQVCFELDIENLATNTILESI
HLAEIEGILGNELGDESNVAMFDDIKNTSNNSNTKNGANQNTTNDTTSSFDKLSITNKFR
SAINHQISGCEKEFNILRNLVSKWKLDLVSGSNSKRNEISSRYSNYLLLHFYRWISSTNS
KLYDPILYRTLHQLMKKVFIQLIFEFKKLGSKIVYANFNKIIICSQKDSIEDARSYCNYI
LAVIKKKELFSWINFKQTNYYHNLLWLNNSNYSGILYFNPLINKNQQQQQQQQDNADDDD
DDDVSENEEEQQQNKNKKLKKIKNGKIITNWNIAEFLPPQIQTSFIIIISDYIYKLHTER
DELNRIQKEQQQRYLLKQKISTTSSSSNNDSTAATTTTTKDTINEPTKPDLRKSSTWNEE
EDEDISIPPSSSSSTTTTTSKTKKATSKFDLLIDVNRIFTLLDHFQVNQSSLEFPQLPGG
YLKLNNPPLEFIKFVCHVLSIDKSISSRVSRLRMKLMTSMKVREFSDEAKFKDPCVSFTL
PDVICSSCHSCRDIDLLRNTNTTSISSRLSSQQKSNNNDSDDSDDDNEENEGDDDNIIRV
PELSCIQCKGHYSKNTIESQLVEIIQRRSLSYQLQDLRCSKCNDVKSDNLGDICPQCSGQ
WECTQSNNLFSKDLIIFKSIAEYHNFEWLGETVDSLSKFI
NT seq 7143 nt   +upstreamnt  +downstreamnt
atgtctcaaaaatggaatgaaaataaaaaaaataaagatgaaaaagatgaaaacgataaa
tatgttggtttcaaaaattatgaaaaggagggttggttattaaatatgcaacctggatca
tcaaaagatggacttgatattgaaaaagcttcattagaattattttttattcaagatgat
gcaacatcatttagagtatggataccttataatccatatttttatatttatgtaaaggaa
ggtcatcaatcagaagtagaatcatatttaaagagtacctatgaaaaagatatagcaggt
attgatattatggataaagaggatttagatttagagaatcatttatcaggtttaaaaaga
aaatatttaaaaattcgttttcataacgtttcaacacttttatcagttcgtaatgattta
ttcccaatcattaaaagaaataaacaaaaatcaaatacaagtgaagcatatgaagatgaa
tcattaaataaaattttaaattcatattataataaaggaaataataataataataatcat
caaaattataataataataataatcaaaataataataattttaataaagaattaaataaa
gatgataataataataataatagtaaattaaataaacaagcaactgaatatatattagat
attagagaatatgatgtaccatattatgttagagcagcaattgatttaaatattcgtgtt
gggttatggtatacagttataaagaatggtagattgacaacagtgaatgaattaacgact
cgtgttgatagacctgatccaaaagtgttggcatatgatattgaaactactaagctacct
ttgaaatttccagattcttcaattgattcaattatgatgatctcttatatgttggataaa
caaggttatttaattgtaaatcgtgaaatcgtgtctgaggatatcaaagatttcgaatat
actccaaagcctgaatattatggcccattcaccgtttttaatgaacccgatgagaaatca
gtattggagaggtttttcagtgaaattaaaagagagaaaccccatatattcgtatcgtac
aatggtgatatgtttgattggccttttgttgaaagtagagcagagtatcatggtttgagt
atgtttcatcagattggatttagaaatgataatggcgagtatagaagtaagatcaaccct
catatggatgcattttgctgggtgaagagagacagttatcttccacatggcagtcacggt
ttgaaagcggtcacaagagaaaagttaagatacgatccattagagttggatccagagtta
atgttaaaatctgctcaagaggatcctgaaactttagcaaattactcagtttccgatgca
gttgcaacttattatctctatatgaattatgttcatccattcattttctcactttgtaca
attattccaatgaatccagacgatgtgcttagaaaaggttcaggtacattatgtgaagcc
ttgttaatgactcaagcttttaaagctgatgtaatatttccaaataaacataaggatgat
attaatagtatgtataagggtcatttattagagagcgagacttatgtgggtggtcatgta
gagtgtttagagtctggtgtattcagatcagatattccaactaatttctcattagaccct
gcttcaattgaaaagcatatgggtaacattgatcaagttttgaagtttgcattgaaggag
ggcggcattccattagataccgttagtaattatcaagaagtgaaagaagacgtattaaag
aaattcacattgttaaaagagaatccaaaacaacaatcacatccattaatttaccatctt
gatgtgtctgctatgtatcccaatattattctcaccaataaacttcaaccaactgcagtg
gtcaatgacgaggtttgtgccacttgtgtctacaataaaccagagtctcaatgtcaacgt
actctcgactggcaatggaggggtgactattcaccatcgaatcagtcagagtatcgttta
attctacaacaattggaatctgagaaatttggtgatggagatgaaagaaaatcattctta
tcactaagtgaagagaaacgtaatgaattattaagaaaacgtttaaaagagtactctaga
aaagtctatagaaaaacccatcaaatcacacaagaaattcgttccgacactatttgtatg
cgtgaaaattcattctacgtcgatactgtacgtctattccgtgatcgtcgttatgttttc
aagaatcatcatcgtgattggaagataaagtatgatcaagcaatgcaagaatctggtggt
accaatagtgttgctgtggtagctgcacaaggtatggttgtactctatgaaagtcttcaa
ttagctcacaagtgtattctaaactctttctatggttatgtaatgagaaaaggtgctcgt
tggtattctatgcaaatggcaggtattgtaacacatacaggttcaaacatcattaaagaa
gcaagagaagtggtagagcaaatgggtagaccattagagattgataccgatggtatttgg
tgtatacttccatcacatttcccagagaattacacattaaaatcagccagtactggtaaa
aaagttactttttcttacatttgcgaaatgttgaatgaaaaagttgcaaaaagtttcaca
aatcatcaataccaagattacaatgctgaaaccaacacttatacaattcgtgacgaatgt
tccattctattcgaatgtgatggtccttatcgttgtatgttaattccaactagtaaagag
aaagatgtgaaattaaagaaacgttacgctgtattcaatcgtgaaggtcgtatttgtgaa
ttaaaaggtttcgaaattaaaagacgtggtgaattgaaattgattaaacttttccaatct
gaagtgtttaaagaatttttaggtggtgatagtttggaaggctgttatcagtcggttggt
gccgttgcaaatcgttggttagacattctagatagtcatgctgaaaactatgaagaaaag
gatctaatagaactaattaccgaaagtagtaatatgagtagaaaattagaagaatatggt
acacaaaagagttcagctattagtactgccaaaaagttagcagagtttttaggtgacgat
atgatcaaggataaaggtttatcatgtcaatacattatctccaataaaccagccggttca
ccaattactgaacgtgctttaccagttgcaatttttgatgcagattttgaaactcgttgt
cattatcttagaagatggacaaaatctccaagtggtgatttagatattcgtgaattaatc
gattgggattattatcgtcaacgtttatctggtgtaattcaaaaaattattacaattcct
gctgcacttcaaaatgttacaaatccagtaccacgtgttattcatccagattggatttta
aaagaaattagaagaaatgaagatggtcgtcaacaaacttcaattacttcattttttgaa
aaaactgaagataatgatcaagacaatgataatgataatgataatgataacgataatgat
aatgataattcgaaaccacaacaaactgatgatattgaaaatatgttttcatcaagattt
aaagatttaccagcatttaatccaaaagttactaaatttaaaagaagtaaacaatcatca
agtgatgtttcaagtcttttaattaaaaaatcaaaatcatcaattgaaacatttacaaat
gaacaagaaaaacaaattatggaaactaaaacaccatctattgataaagatttccaaggt
tggttatcaatatcaaaaaagaaatggaaaattcaacgtttattaaaaaagagaagacaa
agattaggtggatcattatttgatagtgatagttttagaattggttcaaaattaacaaat
agagaaagttcatcatcgtcattctttaagagtcaatcagatataattaaaaaaggatat
tggaatattatatcgattgaaccaatttatggcggtgaaccaggtatttatcaaatgtgg
tcattgattgaggatcaattgataccaattaaagttgacattggtagagtgttttattta
aattcaattgataccgatccatatgaagatgcacaaaagaatacaaatgtaataccacca
agaggtaaacaaagatttaatgttttttcagtgacaatgagtgaaagtcaatttttagaa
caatcaaaggaattgaatacactattcaccaatccaatgattgagggtgtctatgaaaca
aaggtaccattggatattaaagccattattcaatgtggttgtgtagctactttgtcaaga
gtatcaccattctttactaaaatagtcaatagtaacacaagattctctttggaggatatc
gcttcaaaacctgataaacaatttcattatcttgcagaacataactttaatcaactcttt
ttgtatcataatagtcgtgatggaaaagacggttatttcgttcttttcaatatgaatact
caacaatgttcagttattttctcaaatccttatatggccgccaacaaaatcgatgcaaga
gtattgaattccataaaggagaaactaccagaaatcacctttacaatggaccaaaaatca
agtatgtctttggcaaaaaaagaaattggttcattaattatggaatatcaacgtaaaggt
ttaccaactatcattctactacaagttccaaatgcaattggaatattggaacaaattcca
atacttagagaattcccacgtgtaccagtaccttaccatgacaacgattcaatgtattca
ccattcaattgggatgttcattcattgaaacccttaccattacgtttaatggatgcacca
aaactttgggtttactatgcaaatatgtcacgttatgcaaatatacccattggtaatatt
ccaactgataatgcatcattcatgtgtgatattctctatgctcgttctttggttgaacaa
aaacatctcctttggatgtctgattcaaacttcccagatttaggtggttcagaagaagat
gatgcaaaattctatgaagaattaaataatgttgaaattaataattcagattgttataat
caagtttgtttcgaattggatattgaaaatttagcaacaaatacaatcttggaatcaatt
catttggctgaaattgaaggtattttaggtaatgaattaggtgatgaatcaaatgttgca
atgtttgatgatattaaaaatacttcaaataattccaataccaaaaatggtgcaaatcaa
aatactacaaatgatacaacatcatcatttgataaattatcaattacaaataaatttaga
tcagcaattaatcatcaaattagtggttgtgaaaaagaatttaatattcttagaaattta
gtatcaaaatggaaattggatttagtatcaggtagtaatagtaaaagaaatgaaattagt
tcacgttattcaaattatcttttattacatttctatcgttggattagctcgaccaattca
aaactttatgatcctatcctttatcgtactttacatcaattaatgaaaaaagttttcatt
caattgattttcgaatttaaaaaattgggtagtaaaatagtttatgcaaatttcaataag
attatcatttgttctcaaaaggattcaattgaagatgctcgttcttattgtaactatatc
ttggctgtaattaaaaagaaagaattatttagttggattaattttaaacaaacaaattat
tatcataatttattatggttaaataattcaaattattctggtattttatattttaatcca
ttaattaataaaaatcaacaacaacaacaacaacaacaagataatgctgatgatgacgat
gatgatgatgtatctgaaaatgaagaagagcaacaacagaataaaaataaaaaattaaaa
aaaattaaaaatggtaaaatcataaccaattggaatattgcagaatttttaccaccacaa
attcaaacttctttcattattatcatttcagattatatttataaattgcatactgaaaga
gatgaattaaatagaattcaaaaagaacaacaacaaagatatttattaaaacaaaaaatt
agtacaacttcctcctcctctaataatgattcaaccgcagcaacaacaacaactacaaaa
gatactattaatgaaccaactaaaccagatttaagaaaaagttcaacttggaatgaagaa
gaggatgaagatattagtattccaccatcttcatcatcatcaacaactacaactacatca
aaaacaaagaaagctacatctaaatttgatttattaattgatgttaatcgtatttttaca
ttattggatcatttccaagttaatcaatcatcattagaatttccacaattaccaggtggt
tatttgaaattaaataatccaccattagaattcattaaattcgtttgtcatgtattatca
attgataaatcaatctcatcaagagtatcacgtttaagaatgaaattaatgacatcaatg
aaagttagagaattctctgatgaagctaaattcaaagatccatgcgtgtctttcacttta
cctgatgtaatttgttcatcttgtcattcatgtagagatattgatttattaagaaataca
aatacaacttctatctcttcaagattatcttctcaacaaaagagtaacaacaatgacagt
gatgatagtgatgatgataatgaagaaaatgaaggtgatgatgacaatattattagagtt
ccagaattatcttgtattcaatgtaaaggtcattattctaaaaatactatcgaaagtcaa
ttagttgaaatcattcaaagacgttcattatcttatcaattacaagatttaagatgctca
aaatgtaatgatgttaaatctgataaccttggtgatatttgtccacaatgttctggtcaa
tgggaatgtactcaatcaaataatttattttctaaagatttaattatctttaaaagtatt
gcagaatatcataattttgaatggttaggtgagactgttgattcattatccaaatttatt
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (121)   
   KEGG ORTHOLOGY (1)   
   RefGene (116)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (140)   

Download RDF
DBGET integrated database retrieval system