KEGG T00245: DDB

Dictyostelium discoideum (cellular slime mold): DDB_G0283597

Entry

DDB_G0283597 CDS T00245

Gene name

eIF3s9

Definition

RNA recognition motif-containing protein RRM

Orthology

K03253

translation initiation factor 3 subunit B

Organism

ddi Dictyostelium discoideum (cellular slime mold)

Pathway

ddi03013

RNA transport

Class

Genetic Information Processing; Translation; RNA transport [PATH:ddi03013]

SSDB

Motif

Pfam:

eIF2A RRM_1 RRM_5 RRM_6 Viral_protease

Other DBs

NCBI-GI:

NCBI-GeneID:

DictyBase:

UniProt:

Position

AA seq 670 aa
MTIFDSDEEELVTTLSDFEPPVQIDTSFNKFIVVDNIPVAPEAKHEKLKSILVKIYQNRP
GAEVVGIHLALDAQRNTKGFAFIEYSKKESAIDAATSLNNYPLDKSHTLKVNLLDDFSKF
ANFEETYKPPTREDFKPKPNYNQWLSDPKALKGYDQFVTRYGDYTDICWNEMHVGKPMVE
KSSVSLTSSYVQWSNTGSYLVTFHPDGIALYGGKDWIQVNLFEHRGVQLVDFSPEDKYLI
TFAPIASDNPNSPKSIVVWDVRSGKKLRSFLAPPKEQFTWPAFQWSAKDKYIARIEQLEK
GINIYETPSMNLLDDKIFEVKGIKDFSWSPTDLSLAYFVPANDPLPAKICLVEMPSKKLL
AEKSIWGATDARFHWQNEGAYLCVKTDKVATGKTKKEKIPTTSFELFRTHEPNVPIESFE
IQYAIKAFSWEPRGKRICIIHGEFKMNMFVSFFEVQKTSVKLISKLENRKLNTIFWSPRG
TLVLLANLGDTGELEFYNTQDCESYGTQEHLQCTGVDWNPSGRYVTTFVSHWKVQTDTGF
NIWSFNGDLVYSVLKDRFFQFNWRPRPKFMLTNKEINQIKQNIKKYQEKFDKQDEDDNKA
IQHIEQTRLDNLMKEFLSFLQKGEQEYQALEPTRKQLGSYEDIDPNDIYESIETIEELID
IKTIVLKKIN

NT seq 2013 nt +upstreamnt +downstreamnt
atgacaatctttgatagcgacgaagaagagttagttactactctcagtgatttcgaacca
ccagttcaaattgatacttcattcaataaatttattgtagttgataatattccagttgca
ccagaggcaaaacacgagaaattgaaatctattttagttaaaatctatcaaaatagacca
ggtgctgaagttgttggtattcatttagcattagatgctcaaagaaatactaaaggtttt
gcatttattgaatattcaaaaaaagaatcagcaattgatgcagcaacttcattaaataat
tatccattagataaatcacatacattaaaagttaatttattagatgattttagcaaattt
gccaattttgaagaaacttataaaccaccaactagagaagattttaaaccaaaaccaaat
tacaatcaatggttatcagatccaaaagcattgaaaggttatgaccaatttgtaacacgt
tatggtgattatacagatatttgttggaatgagatgcatgttggtaaaccaatggtagag
aaatcatcggtttcattgacctcatcatacgttcaatggtcaaacactggtagttattta
gttacattccacccagacggcattgctttgtatggtggtaaagattggattcaagtgaat
cttttcgaacatcgtggtgttcaattggtagatttctcaccagaggataaatatttgatt
acatttgcaccaattgcatccgataatccaaactcaccaaaatccatcgtagtatgggat
gtacgtagtggcaagaagttgagatcattcttggccccaccaaaggagcaattcacatgg
ccagccttccaatggtccgccaaggataaatacattgcacgtatcgaacagttggagaag
ggtatcaacatctatgaaactccatcaatgaatcttttagatgataaaattttcgaagtc
aaaggtatcaaagatttcagttggtcaccaaccgatttatcattggcctactttgtacca
gcaaatgatccattaccagcaaagatctgtctcgttgagatgccatccaagaaactcctc
gccgaaaagagtatttggggtgccaccgacgcccgtttccattggcaaaatgaaggtgct
tatctttgtgtaaagaccgataaagttgccactggtaagaccaaaaaagaaaagattcca
accactagctttgaactcttccgtactcatgaaccaaacgtaccaattgaatcctttgaa
attcaatacgcaatcaaagccttctcttgggaaccaagaggcaagagaatttgtatcatt
catggtgaattcaagatgaacatgtttgttagtttctttgaagttcaaaaaacaagtgtt
aaactcattagtaaattagagaatcgtaaattgaataccatcttttggtcaccacgtggt
actttggtattattggccaatttgggtgacactggtgaattggaattctacaacactcaa
gactgtgaatcctatggcactcaagaacatctccaatgtactggtgtcgattggaatcca
tctggtcgttatgttaccacctttgttagtcattggaaggttcaaaccgatactggtttc
aacatttggtcattcaatggtgatctcgtctactctgtactcaaggatcgtttcttccaa
ttcaattggcgtccaagaccaaaattcatgctcaccaataaagaaatcaatcaaatcaaa
caaaacatcaaaaaatatcaagagaaattcgataaacaagatgaagatgataataaagcc
attcaacatattgaacaaactcgtcttgataatttaatgaaagaatttttatctttcctt
caaaaaggtgaacaagaatatcaagcactcgaaccaactagaaaacaacttggttcttat
gaagatattgatccaaatgatatctatgaatcaattgaaacaattgaagaacttattgat
attaaaactattgttttaaagaaaataaattaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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