KEGG T00245: DDB

Dictyostelium discoideum (cellular slime mold): DDB_G0285117

Entry

DDB_G0285117 CDS T00245

Gene name

rad54b

Definition

CHR group protein

Orthology

K10877

DNA repair and recombination protein RAD54B [EC:3.6.4.-]

Organism

ddi Dictyostelium discoideum (cellular slime mold)

Pathway

ddi03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:ddi03440]

SSDB

Motif

Pfam:

SNF2_N Helicase_C DUF2439 AAA_22 HTH_26 HCV_NS2

Other DBs

NCBI-GI:

NCBI-GeneID:

DictyBase:

UniProt:

Position

AA seq 989 aa
MKKSSKGFVSPYKDSNTTSTPSINHLASKPKKITTSTTSTTSTTTTSSSSSPIETQKTKS
KANSSSNNNDKSEDKTNDGELIHYKIGWCAKSTKKHKIYNDGYLMYDQDKKIFTLYDDCG
KENGKSVTVNIQDVKPDTKVFISSKEVLIEHIITSKEFEKATGLESSLVSNSTSSSSLST
TTIRKLSKKQQKLQEEEEEKQQQQQDEKQTTNINKSTIKKEFKSHTSLEEQKSSKKIVCP
HDPNSKDALIFYSPPPSQLDEEGNKVVHVVLDPYIGRHLRPHQRRGVKFLYDCVTGNSND
NGYSGAILADQMGLGKTLQTLALLWTLLKQSPYGKPTIKKAIIVTPSTLVNNWKSEIQKW
FGNGRLIASTLTDSLTKETKANLNDFNTSIKPVLIISYEQCRIFSKELETMSCGLMVCDE
AHRLKNSNAKTTQSIMSVRCDRKILLTGTPIQNNLVEFYSMMDFANPNCLGSLADFKKSF
IIPINKSRESPNSTSTSEGIRKSIQLSKLVKPFIIRRKSNILEKYLPPKRVQIIFCKLSS
LQIELYKSILNSNSVKSLLSGGGSRGSATSLSTITLLKKLCNSPSLLLLNNKQDEGGEQQ
QTEIQNILKKHNYTLENYQEIQEQQDNESGKLLFVESLIKQLKPMNEKLVLVSNFTKTLD
VFERLCKRLSIDTLRLDGDVKADSRQALVDKFNSSTQNVSSSKSSSSQYQVFLLSAKAGG
VGINLIGGNHLVLYDPDWNPAIDIQAMERIWREGQTKPVFIYRLFSTGTIEEKIYQRQLM
KESISNSIVDKKFNDNGGNFSLEDLKDIFSYNENTNSDTHDLLQCNCGNSNSNASTSINI
KRIEIFKTIQHLDKWEHYRDVDQFSKQCNHDSILKKLKSKQDPISFIFISKTPIPSNNDL
DDDQNDDDDFSFLEVENQIEDEEEDNNQQNTTPSKKRSNKKKEVDEEEEQEEEGEEEEET
NPQTNLRKRAKINIVEDNDDDDLSDLDMS

NT seq 2970 nt +upstreamnt +downstreamnt
atgaaaaaaagtagcaaaggatttgtttcaccttacaaagattcaaacacaacatcaact
cctagcattaatcatttagcatcaaaaccaaaaaaaataacaacatcaacgacatcaaca
acttcaacaacaacaacatcatcatcatcatctcctatagaaacacaaaaaacaaaatcg
aaagcaaatagtagtagcaataataatgataaaagtgaagataaaactaatgatggagaa
ttaattcattataaaattggttggtgcgcaaaatcaactaaaaaacataagatttataat
gatggttatttaatgtatgaccaagataaaaaaatatttacattatatgatgattgtggt
aaagagaatggaaagagtgtaacagtgaatatacaagatgttaaaccagatacaaaagta
ttcatctcttcaaaagaagtattaattgaacatataattacaagcaaagaatttgaaaaa
gcaactggtttagagtcatctttagtttcaaattctacatcatcatcatcactatcaaca
acaacaattagaaaactaagtaaaaaacaacaaaaacttcaagaagaagaggaggaaaaa
caacaacaacaacaagatgaaaaacaaacaacaaatattaataaatcaacaattaaaaaa
gaatttaaaagtcatactagtttagaagaacaaaaaagttcaaaaaagattgtttgtcca
catgatccaaattcaaaggatgcattaatattttattcaccaccaccaagtcaattggat
gaagaaggtaataaagttgttcatgttgtattggatccatatattggtagacatttaaga
cctcatcaaagaagaggtgttaaattcctttatgattgtgttacgggtaattcaaatgat
aatggatacagtggtgctattttagctgatcaaatggggttaggtaaaacattacaaact
ttagctttactttggacattattgaaacagtcaccatacggcaaaccaacaataaaaaag
gctatcatagttacaccatcgacattggttaacaattggaagagtgaaattcaaaaatgg
tttggcaatggtcgtttgattgcatcaactttaacagattcattaacaaaagagacaaaa
gcaaatttaaatgatttcaatacatcgattaaacccgtattaattatctcttatgaacaa
tgtagaatcttttcaaaggaattggaaacgatgagttgtggtttaatggtttgtgatgaa
gctcatcgtttaaagaattcaaatgcaaagaccactcaatcgataatgagtgttagatgt
gatagaaagattttattaacaggtacaccaattcaaaataatttagtggaattttattca
atgatggattttgctaatccaaattgtttaggttctttagctgactttaaaaaatcattc
atcataccaattaataaatctagagaatcaccaaattcaacttcaacttcagaaggtatt
agaaaatcaattcaactctcaaaattggttaaaccattcatcattagaagaaaatcaaat
attttggagaaatatttaccaccaaaaagagtacaaatcatattttgtaaattatcatca
cttcaaattgaattatataaatcaattttgaattcaaatagtgttaaatcattattatca
ggtggtggtagtagaggttcagcaacttctctttcaacaataacattattaaagaaatta
tgtaattcaccatcattattattattaaataacaaacaagatgaaggaggagaacaacaa
caaactgaaattcaaaatatattaaagaaacataattatacattagaaaattatcaagag
attcaagaacaacaagataatgaatctggtaaattattatttgttgaatcattgattaaa
caattaaaaccaatgaatgaaaaattggtattggtttcaaatttcacaaaaacattggac
gtctttgagagattatgtaaacgattatcaattgatacacttagattggatggtgatgtt
aaagctgattcaagacaagcattggttgataaatttaattctagtactcaaaatgtttca
tcatcaaaatcatcgtcatcacaatatcaagtgtttttgttatctgcaaaagctggtggt
gttggtattaatttaattggtggtaatcatttggttctatatgatccagattggaatcct
gcaatcgatattcaagcaatggaaagaatttggagagaaggtcaaactaaaccagttttc
atctatagattattttcaacaggtacaattgaagagaagatttatcaaagacaattaatg
aaagaatcaatttcaaattcaattgttgataaaaagtttaatgataatggtggtaatttc
tcattggaagatttaaaagatatcttttcttataatgaaaatacaaattcagatactcat
gatttattacaatgtaattgtggtaatagtaatagtaatgctagtactagtataaatatt
aaaagaatagaaatatttaaaactattcaacatttagataaatgggaacactatagagat
gtagatcaattttcaaaacaatgtaatcatgattcaatattaaagaaattgaaatcaaaa
caagatccaatttcttttattttcatttctaaaacaccaataccatcaaataatgattta
gatgatgatcaaaatgatgatgatgatttttctttcttagaagtagagaaccaaattgaa
gacgaagaagaggataataaccaacaaaataccacaccatcaaagaaaagatcaaataaa
aagaaagaagttgatgaggaggaggagcaggaggaagaaggagaagaagaagaagagaca
aatcctcaaaccaatttaagaaagagagcaaaaataaatattgttgaagataatgacgat
gatgatttgtcagatttagacatgtcataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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