KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0291804
Entry
DDB_G0291804      CDS       T00245                                 
Symbol
ddx6
Name
(RefSeq) DEAD/DEAH box helicase
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13]
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DDB_G0291804 (ddx6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ddi03019]
    DDB_G0291804 (ddx6)
   03036 Chromosome and associated proteins [BR:ddi03036]
    DDB_G0291804 (ddx6)
Messenger RNA biogenesis [BR:ddi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     DDB_G0291804 (ddx6)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     DDB_G0291804 (ddx6)
Chromosome and associated proteins [BR:ddi03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    DDB_G0291804 (ddx6)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 8628344
NCBI-ProteinID: XP_629938
dictyBase: DDB_G0291804
UniProt: Q54E49
Position
6:773358..774746
AA seq 423 aa
MNSQQNKLPQQPQQPPSSIVDDDNWKSQLKLPPRDERRQTEDVTATEGNDFDDLHLKRDL
LRGIFEKGYVKPSPIQEKAIPIALAGRDIMARAKNGTGKTASFLIPALEKTDPTKDVIQV
LILVPTRELALQTSQVCKELGKYMNVQVMASTGGTSLKDDIMRLYNPVHILVATPGRVLD
LAQKNVANLSNCHTMIMDEADKLLSQEFQPLVEQLINFLPQQRQILLFSATFPVTVKSFK
EHYLQQAFEINLMEELTLKGVTQYYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVE
LLAKKITELGYSCFFIHAKMVQAHRNRVFHDFRNGACRNLVSSDLFTRGIDIQDVNVVIN
FDFPKHSETYLHRIGRSGRFGHLGLAINLITYEDRFSLYKIEQELGTEIKPIPPVIDKSL
YAA
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgaatagtcaacaaaataaattaccacaacaaccacaacaaccaccaagttcaattgtt
gacgacgataattggaaatcacaattaaaattaccaccaagagatgaaagaagacaaaca
gaagatgttacagcaacagaaggtaatgattttgatgatttacatttgaagagagattta
cttagaggtatttttgagaaaggatatgtaaagccatcaccaattcaagagaaggcaatt
ccaattgcattagcaggtagagatattatggcacgtgcaaagaatggtacaggtaagaca
gcatcatttttaattccagcattagagaaaacagatccaaccaaggatgtcattcaagta
ttgatattggtaccaaccagagagttggccttacaaaccagtcaagtatgtaaggagttg
ggtaaatatatgaacgttcaagttatggcatccactggtggtacatctctcaaggatgat
attatgcgtttgtataatccagtacatattttagtggccactccaggaagagttcttgat
ttggctcaaaagaatgttgcaaatctctccaattgtcacacaatgatcatggatgaagcc
gataaactattgtcacaagaattccaaccattggtagaacaattgatcaatttcctccca
caacaacgtcaaatcctcttgttttctgccacttttcccgtcactgtaaagagtttcaaa
gaacactaccttcaacaagcctttgaaatcaatcttatggaagagttgaccttgaaaggt
gtcacccaatattacgcctttgtcgaggaacgtcaaaagattcattgtctcaatactctc
ttctcaaagttacaaatcaatcaatccatcatcttttgtaactctgtcaatcgtgtagag
ttattggcaaagaaaatcactgaactcggttacagttgtttctttattcatgctaaaatg
gttcaagctcatcgtaatcgtgttttccatgactttagaaatggcgcttgtcgtaatctc
gtctcctctgatctcttcactcgtggtatcgatattcaagacgttaatgttgtcatcaat
ttcgatttcccaaaacattctgaaacttatctccatcgtattggtcgttcaggtcgtttc
ggtcatctcggtttagccattaatctcatcacctatgaagatcgtttctcactctacaaa
attgaacaagaattaggtactgaaattaaaccaattccaccagttattgataaatcttta
tatgctgcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (49)   

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