KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0293226
Entry
DDB_G0293226      CDS       T00245                                 
Symbol
rvb1
Name
(RefSeq) AAA ATPase domain-containing protein
  KO
K04499  RuvB-like protein 1 [EC:5.6.2.4]
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    DDB_G0293226 (rvb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ddi03036]
    DDB_G0293226 (rvb1)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ddi03037]
    DDB_G0293226 (rvb1)
Enzymes [BR:ddi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DDB_G0293226 (rvb1)
Chromosome and associated proteins [BR:ddi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     DDB_G0293226 (rvb1)
  Chromatin remodeling factors
   SRCAP complex
    DDB_G0293226 (rvb1)
   INO80 complex
    DDB_G0293226 (rvb1)
   INO80 complex (yeast)
    DDB_G0293226 (rvb1)
   SWR1 complex
    DDB_G0293226 (rvb1)
   ASTRA complex
    DDB_G0293226 (rvb1)
Cilium and associated proteins [BR:ddi03037]
 Motile cilia and associated proteins
  Dynein assembly factors
   DDB_G0293226 (rvb1)
SSDB
Motif
Pfam: TIP49 TIP49_C AAA RuvB_N AAA_22 AAA_5 AAA_16 AAA_19 Mg_chelatase AAA_25 AAA_18 bpMoxR DnaB_C AAA_28 IstB_IS21 Zeta_toxin ResIII nSTAND3 TsaE Rad17 AAA_7 NAM-associated
Other DBs
NCBI-GeneID: 8629120
NCBI-ProteinID: XP_629238
dictyBase: DDB_G0293226
UniProt: Q54C28
Position
6:complement(2678243..2679944)
AA seq 523 aa
MSENNTDTVMGDSNPSTKITETPMNETPSSTTTTTATTTTTATTPPQQTQQPPQPQLSTT
VTETTPTTRIEEIKSVKSQRVATHSHIKGLGLLENGTASNIADGLVGQCKAREAAGIVTE
LIKSKKMAGKALLLAGPPGTGKTALALAISQELGTKVPFCPMVGSEVYSSEVKKTEILME
NFRRSIGLRVKEIKEVYEGEVTEITPEETDNPLGGYGKTIAHVVIGLKTTKGTKQLKLDP
TIYESIQKEKITVGDVIYIEANSGSVKRVGRSDFYATEHDLEAEEYVPLPKGEVFKKKDI
IQDVTLHDLDLANAKPQGGQDIMSMMGQMMKPKKTEITEKLRLEINKIVNRYIEQGVAEL
VPGVLFIDEVHMLDIECFSYLNRALESTLAPIVVFATNRGNCVIKGTDNDIQSPHGIPVD
LLDRLMIIRTLPYNYNEIVQILTIRASIENHKIDDEALMYLAEIGNTASLRYAIQLLTPA
SILSKTYSRPSITKEDIEEVTSLFNDAKTSAKLLEQNKSKYLY
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgtcagaaaataatacagatacagttatgggtgattcaaatccatcaactaaaattaca
gaaacaccaatgaatgagacaccatcatctaccaccaccaccaccgcaactactacaact
acagccacaacaccaccacaacaaactcaacaaccaccacaaccacaactttcaaccaca
gtaacagaaaccacaccaaccactagaatagaagaaattaaatcagttaaatcacaaaga
gttgcaacacatagtcatattaaaggtttaggtttattagaaaatggtacagcttcaaat
attgcagatggtttagtaggccaatgtaaagcaagagaagcagcaggtattgttacagaa
ttaattaaatcaaaaaaaatggcaggtaaagcattattattagcaggaccaccaggtaca
ggtaaaacagcattagcattagcaatttcacaagagttaggtacaaaagtaccattttgt
ccaatggtaggatcagaggtatattcatcagaagttaaaaagacagagatattgatggag
aattttagacgttcaattggattgagagttaaagagattaaagaggtttatgagggtgaa
gttacagagataacaccagaggaaacagataatccattgggtggttatggaaagactata
gcacatgttgtaattggattaaagacaaccaaaggtacaaaacagttgaaattggatcca
accatctacgaatccattcaaaaggagaagatcacagtaggagatgtaatctacatcgag
gccaacagtggatcagtaaagagagtcggtcgttcagatttctatgcgaccgagcatgat
ttagaggcagaggaatacgtgccattaccaaagggtgaggtattcaaaaagaaagatatc
attcaagatgtaaccctccacgatttagatttagcaaatgcaaagccacaaggtggtcag
gatatcatgtcgatgatgggtcaaatgatgaaacccaagaaaacagagatcacagagaaa
cttcgtttggaaattaataaaattgtaaatcgttacattgagcaaggtgtagcagagttg
gtaccaggtgttttgttcattgatgaggttcacatgttggatatagaatgtttttcatac
ttaaatcgtgcattggagtcaacattggcaccaattgtagtttttgcaaccaatcgtggc
aattgtgtaatcaaaggcaccgataacgatattcaatctccacatggcatccctgtggat
cttttagatcgtcttatgatcattcgtacccttccatataattacaatgaaatcgttcaa
attctcaccattcgtgcctcaattgaaaatcataaaatcgatgacgaagcattgatgtat
ttagctgaaattggtaatacagcttcacttcgttatgcaattcaattattaacaccagct
tcaatcctttcaaaaacttattcaagaccatcaattacaaaagaagatattgaagaagtt
acatcattatttaatgatgctaaaacttctgcaaaattattagaacaaaataaatcaaaa
tatttatattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (22)   
   Pfam (22)   
All databases (71)   

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