KEGG T00245: DDB

Dictyostelium discoideum (cellular slime mold): DDB_G0293228

Entry

DDB_G0293228 CDS T00245

Gene name

gtf2h4

Definition

TFIIH subunit

Orthology

K03144

transcription initiation factor TFIIH subunit 4

Organism

ddi Dictyostelium discoideum (cellular slime mold)

Pathway

ddi03022	Basal transcription factors
ddi03420	Nucleotide excision repair

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:ddi03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ddi03420]

SSDB

Motif

Pfam:

Tfb2 Helicase_C_3 RepA_C

Other DBs

NCBI-GI:

NCBI-GeneID:

DictyBase:

UniProt:

Position

AA seq 483 aa
MTLSKVFQYLASLDSKDLEELYKDPWTCQAILRSLPPRSKQYILKMLLVDTYPLSLAKDW
STQASIQQHKESLKKLFDLKIIFLDKINKPIQPQQQQSSQQSSSQQQQQQQQQQQQTEQT
IRLNPLFQDNIKRSLVQVNQVIFSNNSSIKDNHKPPSIDDLDSYSKSQWEKVLYFLSDDT
VQPSKLISELLLSSNLTKQEGDGLSITSEGFKFLLKDVYTQIWTLLIVYLDDLEKKKGKG
SGSRNDLLSFLFRLSFLNLGRGYLVSELSEQQKEYLFALKQFGLIYMRTDSSILFYPTRL
IISLTTGKTLSLIQSISSERTQTQKEQGYIVLETNYRLYAYTSSSLQISLLSLFVKMLYR
LPNLAVGIITRESIRTALIHGITADQIIDFVRHNSHPNAANSGQPIPDVVAEQILLWEAE
RNRITYTKSVLYNSFPTNDCYIATLKFAKEQDYYIWSHDPLKTLVVKEEGNDPIRNFIKK
NFA

NT seq 1452 nt +upstreamnt +downstreamnt
atgacactttcaaaagtatttcaatatttagcaagtttagattcaaaagatttagaagaa
ttatataaagatccatggacatgtcaagcaattctaagatcattaccaccaagatcaaaa
caatatatattaaagatgttattagttgatacttatcctctaagtttagcaaaggattgg
tcaacacaagcatcaatacaacaacataaagaatcattaaagaaattatttgatttaaaa
attatctttttagataaaattaataaaccaattcaaccacaacaacaacaatcatcacaa
caatcatcatcacaacaacaacagcaacaacaacagcaacaacaacaaactgaacaaaca
attagattaaatccattatttcaagataatataaagaggtcattagttcaagtcaatcaa
gtaatattttcaaataatagtagtataaaagataatcataaaccaccaagtattgatgat
ttagattcatattcaaaatcacaatgggagaaagttttatattttttatcggatgataca
gttcaaccatcaaagttaatatcggaattattgttatcatcaaatttaacgaaacaagag
ggtgatggattatcaattacatcagaggggtttaaatttttattaaaagatgtttataca
caaatttggacattgttaattgtttatttggatgatttggagaaaaagaaaggtaaagga
agcggatcgagaaatgatttgttaagttttttatttaggttatcatttttgaatttgggt
agaggttatttagtttcagaattgtctgagcagcagaaagagtatttattcgcattgaag
cagtttggcttgatttatatgaggactgatagcagtatactgttttatccaactcggtta
atcatttcattgaccactggtaaaacgttgtcgttgatacaaagtatttcgtcagagaga
actcagactcagaaggagcagggctatatagtgttggagacgaattacagactttacgca
tacacctcttcctctttgcaaatctcgttgttgagtttgttcgtcaagatgttatatagg
ttaccgaatttagcggttggtatcattacgagggagagtattagaaccgctttgattcat
ggtataactgctgaccaaatcattgactttgttagacataatagtcatccaaatgctgcc
aactctggtcaaccaataccagatgtcgtcgctgaacaaatcttactttgggaagctgaa
agaaatcgtatcacttatactaaatctgtactctataattcatttccaacaaatgattgt
tatattgcaacattaaaatttgcaaaagaacaagattattatatttggtctcatgatcct
ttaaaaactttagttgttaaagaagaaggaaatgatccaattagaaattttattaaaaag
aattttgcttga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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