KEGG T00245: DDB

Dictyostelium discoideum (cellular slime mold): DDB_G0293546

Entry

DDB_G0293546 CDS T00245

Gene name

mre11

Definition

3'-5' exonuclease

Orthology

K10865

double-strand break repair protein MRE11

Organism

ddi Dictyostelium discoideum (cellular slime mold)

Pathway

ddi03440	Homologous recombination
ddi03450	Non-homologous end-joining

Module

ddi_M00291

MRN complex

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:ddi03440]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ddi03450]

SSDB

Motif

Pfam:

Mre11_DNA_bind Metallophos

Other DBs

NCBI-GI:

NCBI-GeneID:

DictyBase:

UniProt:

Position

AA seq 689 aa
MEEEEIIEPKDFENEESENIQMDENEKQIPIQTTNDPQNKNIMRILVATDNHLGYLERDP
IRGDDSFNSFEEILKYAHTLKVDMVLLGGDLFHDNKPSRSCLYRTMELFRKYCLGDSPVR
IQFLSDQSVNFSNQFHTVNYEDPNFNISLPIFSIHGNHDDPTGEGGLAALDLLSVSNLVN
YFGKTEDIDDITVYPLLLGKGETKIAIYGLGNIRDERLHRTFQKQSVKLMRPVESKDEWF
NILVLHQNRVAHNPKNYVHEKMIESFIDFVLWGHEHECLVNPQASSVGEFHISQPGSSVA
TALSEGESKDKFVGLLEVYKNQFRFKPFPLNTVRPFIMDQIILANSNIHPTQQNDVIQWI
EQKVESMIEQAKLKSQGKPNESMLPLIRLKVDYTGYSTINPQKFGQRFQGRVANPNDVLL
FHRKKPTTLSSKKQKDGGELDVNSIKEKEEDKVKVADFISEFLGNTPNDRLQILSENDLF
NSLHSFVEKDETDSILKMVDLSLKSTQKYLNSKISSKDAYPDFIAKYIDDNFPLPHQNVS
SVNSDLLPINNPNEFESNLLDEDSHGHEHGHSHNHSQMIDNDDDENILNQRTIFKSPQSN
KTAPTTTTTTTTTTSSQISTRRKSSTQSSTQSSQTSIIIDDDDDDDEINEDNDDNDKDFE
SDEEKTPPSKKRGKVKQVGSVSKRSRSKK

NT seq 2070 nt +upstreamnt +downstreamnt
atggaagaagaagaaataattgaaccaaaagattttgaaaatgaagaatcagaaaatatc
caaatggatgaaaatgaaaaacagataccaattcaaactacaaatgatccacaaaataaa
aatataatgagaattttagttgcaacagataatcatttaggatatttagaaagagatcca
attagaggtgatgattcatttaattcatttgaggagatattaaaatatgcacatacatta
aaagttgatatggtattattgggtggtgatttatttcatgataataaaccatcaagatca
tgtttatatcgtacaatggaattatttagaaagtattgtttaggtgattcaccagttaga
attcaatttctatcggatcaatctgttaatttttcaaatcaatttcatacagtgaattat
gaagatccaaattttaatatttcattaccaatattttcaatccacggtaatcacgatgat
ccaactggtgagggtggtttggcagctttagatttattatcagtttcgaatctagtcaat
tatttcggtaaaactgaagatattgatgatattacagtctacccattactacttggtaaa
ggtgagacaaaaatagcgatctacgggttaggtaatattagagatgagcgtttgcataga
acttttcaaaagcaatcagtgaaattaatgagaccggtggaatcaaaagatgaatggttc
aatattttagtacttcatcaaaatagggtagcccacaatccaaagaattatgttcacgag
aagatgatagaaagtttcatagatttcgttctatggggacacgaacatgaatgtttagtc
aatccacaggcatcgtcagtgggagaattccatatttcacaacctggttcttcagtagct
acagctttatcagagggtgaatcaaaggataaatttgtaggattgttggaggtttataaa
aatcaattccgttttaaaccattcccattgaacacggttagaccattcattatggatcaa
atcatacttgcaaatagtaacatacatccaacacaacagaatgatgtaattcaatggatt
gagcaaaaagtagaatcaatgattgaacaagccaaattaaaatctcaaggtaaacccaac
gaatcaatgttaccattgataagattaaaagttgattatactggttatagtactatcaat
cctcaaaagtttggtcaaagatttcaaggccgtgtagcaaatccaaatgatgttttatta
ttccacagaaagaaaccaaccactttatcaagtaaaaaacaaaaggatggtggtgaattg
gatgtgaattcaatcaaagaaaaagaagaagataaagtgaaagtggccgatttcataagt
gaattcttgggtaatacaccaaatgatcgtttacaaattctatcagagaatgatctattc
aatagtttacattcattcgttgaaaaggatgaaaccgattcaatattgaaaatggttgat
ctctctttaaaatcgactcaaaaatatttaaattcaaaaatctcttcaaaagatgcttac
ccagatttcattgctaaatatattgatgataatttcccattaccacatcaaaatgtatct
tcggtcaattcagatttattaccaataaataatccaaatgaatttgaatcaaatttatta
gatgaagattctcatggtcatgaacatggtcatagtcataatcatagtcaaatgattgat
aatgatgatgatgaaaacattttaaatcaaagaacaatttttaaatcaccacaatcaaat
aaaacagcaccaacaacaactactaccaccactactactacatcttcacaaatttcaaca
agaagaaaatcttcaactcaatcttcaactcaatcttcacaaacttcaattataatagat
gatgatgatgatgatgatgaaattaatgaagataatgatgataatgataaagattttgaa
agtgatgaagagaaaactccaccatcaaagaaaagaggtaaagttaaacaagttggttca
gtttcaaaaagatcaagatcaaagaaataa

All links

Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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