KEGG   Dickeya dianthicola: DDI_1607
Entry
DDI_1607          CDS       T05141                                 
Name
(GenBank) Ribosomal small subunit pseudouridine synthas A
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
ddq  Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:ddq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ddq03009]
    DDI_1607
Enzymes [BR:ddq01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     DDI_1607
Ribosome biogenesis [BR:ddq03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    DDI_1607
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2
Other DBs
NCBI-ProteinID: ATO32775
Position
1617707..1618405
AA seq 232 aa
MRLDKFLSQQLGISRSLIVRELRAQRVTVNGEVIKSGAFKLLPDHEVTFDDNVLEQQNGP
RYFMLNKPQGYVCSTDDPDHPTILYFIDEPVANKLHAAGRLDIDTSGLVLLTDDGQWSHR
ITSPKHHCEKTYLVTLEQPLAPDTADNFQAGVQLHGEKDLTRPATLEPVSEYQVRLTISE
GRYHQVKRMFAAVGNHVVALHRERIGAITLDDALEPGEYRPLTPEEVAGIGQ
NT seq 699 nt   +upstreamnt  +downstreamnt
atgcgattggataaatttctttcccagcagttagggatcagccgttctctgatagtgcgt
gaactgcgtgcgcagcgtgtgacggtaaacggcgaagtgataaaaagcggcgcattcaaa
ctgctgccggaccatgaggtgacatttgacgacaatgtgctcgaacagcagaacgggccg
cgttacttcatgctgaataagccgcagggatatgtgtgttcgaccgacgatcccgaccat
ccgacgattttgtactttatcgatgaaccggtagcgaacaagctgcacgccgccggccgg
ctggatatcgacaccagcggactggtgctgctgaccgacgacggtcagtggtcgcaccgc
attacctcgccgaagcaccattgcgaaaaaacctatctggtgacgctggaacagccgttg
gcgccggataccgcggacaactttcaggccggggtgcaattacacggtgagaaggacctg
acccgcccggcaacgctggagccggtttctgaataccaggtgcggttgaccatcagcgaa
ggccgctatcatcaggtaaaacgcatgtttgccgcggttggcaaccatgtggtggcattg
catcgtgaacgcatcggcgccattacgctggatgacgcgctggagcccggcgaatatcgg
ccgctgacgccggaagaggtcgccggcatcgggcaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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