KEGG   Dickeya dianthicola: DDI_2997
Entry
DDI_2997          CDS       T05141                                 
Name
(GenBank) Cysteine desulfurase, IscS subfamily
  KO
K04487  cysteine desulfurase [EC:2.8.1.7]
Organism
ddq  Dickeya dianthicola
Pathway
ddq00730  Thiamine metabolism
ddq01100  Metabolic pathways
ddq01240  Biosynthesis of cofactors
ddq04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:ddq00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    DDI_2997
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    DDI_2997
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ddq03016]
    DDI_2997
   03029 Mitochondrial biogenesis [BR:ddq03029]
    DDI_2997
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ddq02048]
    DDI_2997
Enzymes [BR:ddq01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.7  cysteine desulfurase
     DDI_2997
Transfer RNA biogenesis [BR:ddq03016]
 Eukaryotic type
  tRNA modification factors
   Thiolation factors
    DDI_2997
 Prokaryotic type
    DDI_2997
Mitochondrial biogenesis [BR:ddq03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Proteins involved in Fe-S cluster biogenesis
    DDI_2997
Prokaryotic defense system [BR:ddq02048]
 DNA phosphothiolation system
  Sulfur modification proteins
   DDI_2997
SSDB
Motif
Pfam: Aminotran_5 Cys_Met_Meta_PP Beta_elim_lyase DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: ATO34165
Position
complement(3102781..3103995)
AA seq 404 aa
MKLPIYLDYSATTPVDPRVAEKMMQFLTLDGTFGNPASRSHRFGWQAEEAVDIARNQIAE
LVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFD
VTYLAPQRNGIIDLKELEAAMRDDTIVVSIMHVNNEIGVVQDITAIGEMCRSRGIIFHVD
ATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMR
SGTLPVHQIVGMGEAYRIAKEEMAQEAARLRSLRDRLWNGINDIEEVYLNGDLEQGAPNI
LNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGMNDELAHSSIRFSLGRF
TTEEEIDYTIDLVRKSIGRLRDLSPLWEMFKQGVDIGSIEWAHH
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgaagttaccgatttatctggattattccgctacgacgccggtcgatccgcgcgttgct
gaaaaaatgatgcagtttctgaccctggacggtacgttcggcaaccccgcttcccgctcc
caccgttttggctggcaggcggaagaggcggtggatatcgctcgtaaccagatcgccgaa
ctggtcggcgcggatccgcgtgagatcgtttttacttccggcgccaccgagtcagacaac
ctggctatcaagggcgcggcgaacttctaccagaagaaaggcaagcacatcatcaccagc
aagacggaacacaaagccgtgctggatacctgccgccaactggagcgcgaagggtttgac
gtgacttatctggcgccgcagcgtaacggcattatcgatctgaaagagctggaagccgcc
atgcgcgatgacaccattgtggtgtccatcatgcatgtgaacaatgaaatcggcgtggtg
caggatatcaccgccatcggcgaaatgtgccgtagccgcggcatcattttccatgtcgat
gccacccagagcgtgggcaaactgccgatcgacctcagccaactgaaagtcgacctgatg
tccttctcgggccacaagatttacggcccgaaagggattggcgcgctgtatgtgcgtcgc
aaaccgcgcgtgcgtatcgaagcgcagatgcacggcggcggccacgagcgcggcatgcgt
tccggcaccctgccggtgcatcagatagtgggcatgggtgaagcctaccgcatcgccaaa
gaagaaatggcgcaagaagcggcccgcctgcgtagcctgcgcgatcgtctgtggaacggt
atcaacgatatcgaggaagtgtacctgaacggcgacctggaacagggcgcgccgaatatc
ctgaacgtcagcttcaactacgtggaaggcgaatcgctgatcatggcgctgaaagatctg
gcggtgtcttccggttcggcctgtacgtccgccagcctggaaccttcctatgtgctgcgc
gcgctggggatgaacgatgaactggcgcacagttctatccgtttctcactgggtcgcttt
accaccgaagaagaaattgactacaccatcgatctggttcgcaaatccatcggccgcctg
cgcgacttgtctccactgtgggaaatgttcaagcagggcgtggatatcggcagcatcgaa
tgggcgcatcattaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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