KEGG T00880: Deide

Deinococcus deserti: Deide_12460

Entry

Deide_12460 CDS T00880

Gene name

sdhB

Definition

succinate dehydrogenase iron-sulfur subunit

Orthology

K00240

succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]

Organism

ddr Deinococcus deserti

Pathway

ddr00020	Citrate cycle (TCA cycle)
ddr00190	Oxidative phosphorylation
ddr00623	Toluene degradation
ddr00650	Butanoate metabolism
ddr01100	Metabolic pathways
ddr01110	Biosynthesis of secondary metabolites
ddr01120	Microbial metabolism in diverse environments

Module

ddr_M00009	Citrate cycle (TCA cycle, Krebs cycle)
ddr_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ddr_M00149	Succinate dehydrogenase, prokaryotes

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:ddr00020]
Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:ddr00650]
Metabolism; Energy metabolism; Oxidative phosphorylation [PATH:ddr00190]
Metabolism; Xenobiotics biodegradation and metabolism; Toluene degradation [PATH:ddr00623]

SSDB

Motif

Pfam:

Fer2_3 Fer4_8 Fer4_18 Fer4_17 Fer4_10 Fer4_9 Fer4_7 Fer4_2 Fer4_20 Fer4_4 Fer4_15

Other DBs

NCBI-GI:

226356179

NCBI-GeneID:

7738484

UniProt:

C1CVE8

Position

1515335..1516096

AA seq 253 aa
MTQTHAQSAAPVAAPVQMVNLNVKILRFNPETDKKAHWDTYQVQAQPSDRVVDVLNDIKW
YKEPSLTFRRSCQHGICGSDAMLINGRNRLACKTLVRDVAKDGGTITVEPIRGLKVERDL
LVDMEPFFDSYKAIMPYFINESPAPAGERYQSELDAERMEHSSNCILCACCTTSCPIFWV
NGAYLGPAAIVQAHRFIFDSRDEATHQRLNIMNQNTGVWRCRTAYNCTEACPRDIPITTL
IEEVKRAIMFQQS

NT seq 762 nt +upstreamnt +downstreamnt
atgacccagacccatgctcaaagcgccgcccctgtcgccgcaccggtgcagatggtgaat
ctgaatgtcaagattctgcgcttcaaccccgaaaccgacaagaaagcccactgggacacc
tatcaggttcaggctcagcccagtgaccgagtggtggatgtcctcaacgacatcaagtgg
tacaaggaacccagcctgacgttccgccgctcgtgtcagcacggtatctgcggatcagac
gccatgctgatcaacggacgcaatcgcctggcctgcaagacgctggtacgtgacgtcgcc
aaggatggcggcaccatcacggtggagcccattcgcggcctgaaggtcgagcgcgacctg
ctggtcgacatggaaccgtttttcgactcgtacaaggcgatcatgccgtacttcatcaac
gagtcgccggcccctgccggagagcgttaccagagcgaactcgatgccgagcgcatggag
cactccagcaactgcatcctgtgcgcctgctgcacgaccagctgccccatcttctgggtc
aacggcgcgtacctgggcccggctgctatcgtccaggcgcaccgcttcattttcgacagc
cgtgacgaagccacccaccagcgactgaacatcatgaaccagaacactggcgtctggcgc
tgccgcacggcctacaactgcactgaagcctgcccccgcgacattccgattactaccctg
atcgaggaagtcaaacgggccatcatgttccaacagtcctga

All links

Pathway (10)   
   KEGG PATHWAY (7)   
   KEGG MODULE (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (37)   

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