KEGG T00880: Deide

Deinococcus deserti: Deide_16210

Entry

Deide_16210 CDS T00880

Definition

exodeoxyribonuclease V subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

ddr Deinococcus deserti

Pathway

ddr03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:ddr03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 HHH_4 AAA_19 Viral_helicase1 AAA_11 HHH_5 AAA_16 AAA_28 PhoH AAA_17 ArgK AAA_22 AAA Helicase_RecD IstB_IS21 AAA_18 T2SE NTPase_1 AAA_25 KTI12 Zeta_toxin AAA_29

Other DBs

NCBI-GI:

226356603

NCBI-GeneID:

7737296

UniProt:

C1CWM2

Position

1978174..1980306

AA seq 710 aa
MSHALPNEPFRVTGGVNKVRFRAESGFTVMTARLRNNDGEDPDATVIGMMPPLDAGDSFS
ADVLMEEHREYGYQYRVLNLVLEATPADLTEAGVAAYLEARVGGVGKVLAGRIAKAFGPA
TFDLLETEPDKLLQVPGVTASTLHKMVQSWSQQGLERRLLAGLQGLGLTISQAQRAVKHF
GEAALERLTADLFALTEVEGIGFLTADKLWQSQGGALDDARRLTAAAVYALQQAAQQGGH
SYLPRSRAERGVAHYTRVTQAQAQMAVDTAVELGRLSDDTPPLLDTQDPLHDGTRIYLPH
VLRAEKKLAGLIRTLLATPPSGEWSVPAGASKGLSEEQAQILDLLEDHRLVVLTGGPGTG
KSTTTRAVADLAERLGLEVGLCAPTGKAARRLGEVTGRTASTIHRLLGYGPAGFRHNHLE
PAPYDLLIVDEVSMCGDGLMLSLLAAVPPGSRVLLVGDTDQLPPVDAGLPLHALTHAAPT
VRLTQVYRQAAENPIIRAAHGLLQGQAPAWGDPRLNLIETEPDGGARRVALTVRELGGPT
QVQVLTPMRKGPLGVEMLNHQLQSLFNPGQGGVRIGDSEARAGDVVVQTKNDYTNEIFNG
TLGTVLKAEGGRLTVDFDGNIVDLAGAELFNLQLGYALTVHRAQGSEWGTVLGVLHEAHM
PMLSRNLVYTALTRARERFYAVGSATSWQKAAVRQREERNTALLERIKAR

NT seq 2133 nt +upstreamnt +downstreamnt
atgtcacacgccctccccaatgaaccgttccgggtgaccgggggcgtcaataaggtgcgt
ttccgcgccgaaagcggctttaccgtcatgaccgcccggctgcgcaacaacgacggcgag
gacccggacgccaccgtgatcggcatgatgcctccgctggacgccggggacagcttcagc
gctgacgtgctgatggaagagcaccgcgagtacggctaccagtaccgcgtactgaatctg
gtgctggaggccaccccggccgatctgactgaagctggcgttgccgcgtatctggaagcg
cgggtcggcggcgtgggcaaggtcctggcaggacgcattgccaaggcctttggacccgcg
accttcgatctgctggaaaccgagccggacaagctgcttcaggtgcctggagtcaccgcg
tccaccctgcacaagatggtgcagagctggtcgcagcagggcctggaacgccggctcctg
gccggtctccagggcctggggctgaccatctcacaggcccagcgggccgtcaagcatttt
ggagaagccgcactcgaacgcctgactgccgatcttttcgcactcacggaagtcgagggc
atcgggttcctcacggccgacaagctgtggcagtcgcaaggcggcgcactcgatgatgcc
agacggctgaccgctgcggccgtgtacgccctgcagcaggcagcgcaacagggtggacac
tcctatctgccgcgcagccgggccgagcggggcgtggcccactacacgcgggtaacgcag
gcgcaggcccagatggccgtcgacactgccgtggaactcgggcgcctcagtgacgacacg
ccgcctctgctggacacccaggaccctctgcacgacggcacacgtatctatctgccgcac
gtcctgcgggccgagaagaaactggctgggctgatccgcaccctgctggccacgccgccc
agcggcgagtggagcgtgccggcgggcgcctccaaagggctctcggaggagcaggcccag
attctcgacctgcttgaagatcaccgtctggtggtgctgactggcggcccaggaaccggg
aaaagcacgacgacccgcgccgttgccgacctggccgagcgtcttgggctggaagtcggg
ctgtgcgccccgaccggcaaggcagcccggcgtctgggtgaggtgaccggccgcaccgcc
agtacgattcaccggttactgggttacggcccggccggcttccggcacaaccacctggaa
ccggccccctacgacctgctgatcgtggacgaggtcagcatgtgcggcgacggcctgatg
ctctcgctgctcgcagccgtcccgcccggctcgcgggtgctgctggtgggcgataccgat
cagctgcccccggtagacgccgggctgccgcttcacgcgctgacacacgcggcaccgacc
gtccggctcacgcaggtgtaccggcaggccgccgagaaccccatcatccgtgcggcgcac
ggcctgctccaggggcaggccccggcctggggcgacccgcgcctgaatctgatcgaaacg
gagccggacggcggcgcgcggcgcgtggccctgacggtgcgtgaactcggtggccccacc
caggttcaggtgctgacccccatgcgcaaaggaccgctgggggtggagatgctcaaccat
cagttgcagagcctgttcaatcccggccagggtggcgtgcggatcggcgacagcgaggca
cgggccggtgatgtggtcgtgcagaccaagaacgactacaccaacgagatcttcaacggc
acactaggcaccgtactcaaggccgaaggcgggcgactcacggtggactttgatggcaat
atcgtggacctggccggggctgagctgttcaacctccagctgggctacgccctgacggtg
caccgggctcagggcagcgaatggggcaccgtactgggcgtgctgcacgaggctcacatg
cccatgctgtcgcgcaatctggtgtacaccgccctgacccgcgcccgcgagcgcttctac
gcggtgggctcagcgacctcctggcagaaggcggccgtacgtcagcgcgaagagcgcaac
acggccttgctggagcggatcaaggccagatag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (23)   
   Pfam (23)   
All databases (32)   

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