KEGG   Denitrobacterium detoxificans: AAY81_07355
Entry
AAY81_07355       CDS       T04382                                 
Name
(GenBank) helicase UvrD
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ddt  Denitrobacterium detoxificans
Pathway
ddt03420  Nucleotide excision repair
ddt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ddt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AAY81_07355
   03430 Mismatch repair
    AAY81_07355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ddt03400]
    AAY81_07355
Enzymes [BR:ddt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AAY81_07355
DNA repair and recombination proteins [BR:ddt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AAY81_07355
   MMR (mismatch excision repair)
    Other MMR factors
     AAY81_07355
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_30 Viral_helicase1 AAA_12 AAA_14
Other DBs
NCBI-ProteinID: ANE22963
UniProt: A0A172RZC4
Position
complement(1720271..1722607)
AA seq 778 aa
MAIDLNSLNPEQREAVECTEGPLLVLAGAGSGKTRVLTYRIAHMVEDLSVPPWQILAITF
TNKAANEMRERLDGIVGPAARGMWVSTFHSMCVRILRANAEVLGFSNSFTIYADDDSKRL
VKDIMAQQNIDPKRFPVNAIRNRISSAKNELVLPGEFEAQAADPITKVAARVYDELQKRL
RQANAFDFDDLLVFTWLLFKNHPQVLEAYQDRFRYIMVDEYQDTNRAQYAICQLLAAKRR
NLMVVGDDDQSIYSWRGADIRNILDFEKDYPNAHTVKLERNYRSTATILNAANAVIANNV
HRKSKKLISTGEEGEKVQVYLASDERDEGRWIAGEIERQHGKGASYNQFALFYRTNAQSR
TLEDMLLRAGVPYRIVGGTRFFDRAEIRDVMAYLTLAVNPADDMAAKRIINVPRRGIGKS
TVERIDMMAIENACTFLEACQLACADESFRAATRRALGEFTQLIMETSFWEGELRKLVEM
VIDKSRLVRALEEENTDESRGRAENIKEFLGVVDEFAATHDDSDAQFAAPVAGGEGAEQL
GEEPVRVLSGNSLSDFIEWVTLRTDLDTMSDDGTAVTLMTVHAAKGLEFDYVFTAGMEET
IFPHMSSMNDGAGVEEERRLAYVAITRARKRLYLTCAGQRKLFGQTQANPRSRFLAEIPS
ELLSTTGLGSSGFSGTGWEKRGSRRGISGSSAEAGQGRVFGTSSARGTSKRVHTAPKAPQ
KKAAAGATFAIGDIVDHKVFGRGRVVKVDGDTLSIRFSKSGSTKKLLKDYAPIVKIGK
NT seq 2337 nt   +upstreamnt  +downstreamnt
atggcaatcgacctgaattcgctcaatcccgagcagcgcgaagcggtggaatgcaccgaa
ggcccgctgctcgttctcgctggcgccggaagcggcaagacgcgtgtgcttacgtaccgc
attgcccatatggtggaagacctttccgtgccgccttggcagattctggccattacgttt
accaacaaggcggccaacgagatgcgcgagcgtctggatggcatcgtggggccagccgcc
cgcggcatgtgggtttccacgttccacagcatgtgcgtgcgcattctgcgtgcgaatgcc
gaggtgctgggcttttcgaatagcttcaccatttatgccgacgacgacagcaagcgcctg
gtgaaggacatcatggcgcagcagaacatcgatccgaagcgctttccggtgaacgccatc
cgcaaccgcatttcctcggcgaagaacgaactcgtgcttcctggcgagttcgaagcccag
gctgccgaccccattaccaaggtggcggcccgcgtctacgacgagttgcagaagcgcctg
cgccaggcgaacgcattcgacttcgacgacttgctcgtatttacgtggctgctgttcaag
aatcatccccaggtgctcgaggcgtaccaggatcgcttccgctacatcatggtcgacgag
tatcaggacaccaaccgcgcccagtacgccatctgtcagctgctggccgccaagcgtcgc
aacctcatggtcgtaggcgacgacgaccagtcgatttatagttggcgtggcgccgacatt
cgcaacatcctggatttcgagaaggattacccgaacgctcacacggtgaagctagagcgc
aattaccgctctacggctaccatcctgaatgccgccaatgccgttatcgccaacaacgtg
catcgtaagagcaagaagctcatctctacgggcgaagagggcgaaaaggtgcaggtgtac
ctggccagcgacgagcgcgacgaagggcgttggattgccggcgagattgagcgccagcat
ggcaagggcgcaagttacaaccagttcgccctgttctaccgcacgaatgcgcagagtcgt
acgcttgaagatatgttgctgcgtgcgggcgttccgtatcgcatcgtgggcggcacgcga
ttcttcgatcgcgccgagattcgcgatgttatggcgtacctcacgcttgctgtgaatcct
gccgatgacatggcggctaagcgcatcatcaacgtgccgcgccgtggtattggcaagagc
accgtcgagcgcatcgacatgatggcgatcgagaatgcgtgcacgttcctggaggcctgc
cagctggcttgtgccgatgagtccttccgtgctgcaacgcgtcgtgccctgggcgaattt
actcagctcatcatggagacgtccttctgggaaggcgaactgcgcaagctcgtggagatg
gtcatcgataagagccgcctggtgcgcgccctggaagaggagaataccgacgagtcgcgt
ggtcgcgccgagaacatcaaggaattcttgggcgtagttgatgaattcgctgccacgcac
gatgactccgatgcgcagttcgccgcgcccgttgccggtggggaaggtgcggaacagctg
ggcgaagaacccgttcgcgtgctttccggcaactcgctttccgacttcatcgagtgggtt
acgctgcgtaccgacctggataccatgagcgacgacggcacggccgttacgcttatgacg
gtgcatgccgcgaagggcctggagttcgactatgtgttcaccgcgggcatggaagaaacc
atcttcccgcatatgagcagcatgaacgacggtgcgggcgtagaagaggaacgtcgcttg
gcctacgttgctattacgcgcgctcgcaagcgtctgtaccttacctgtgcgggtcaacgc
aagctgtttggtcaaacgcaggcgaatcctcgctcgcgcttcctggccgagattccctcc
gaactgctttccactacgggcctgggttcgtcgggcttctcgggaacgggctgggaaaag
cgtggcagtcgtcgcggcatttccggcagtagcgcggaagcggggcagggacgcgtgttc
ggtacgtccagcgcgcgtggcacgtcgaagcgcgtgcatacggccccgaaggctccccag
aagaaggccgccgcaggtgctacgtttgccatcggcgacatcgtggaccataaggtgttt
ggccgcggtcgcgttgtgaaggtagatggagataccctctcgattcgcttctcgaagagc
ggttccaccaaaaaattgttgaaagactacgctccaattgtcaaaatcggaaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (34)   

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