KEGG T00518: DehaBAV1

Dehalococcoides mccartyi BAV1: DehaBAV1_0908

Entry

DehaBAV1_0908     CDS       T00518

Name

(GenBank) RNAse III

K03685

ribonuclease III [EC:3.1.26.3]

Organism

deb Dehalococcoides mccartyi BAV1

Brite

KEGG Orthology (KO) [BR:deb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:deb03019]
    DehaBAV1_0908
   03009 Ribosome biogenesis [BR:deb03009]
    DehaBAV1_0908
   03036 Chromosome and associated proteins [BR:deb03036]
    DehaBAV1_0908
Enzymes [BR:deb01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     DehaBAV1_0908
Messenger RNA biogenesis [BR:deb03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DehaBAV1_0908
Ribosome biogenesis [BR:deb03009]
Eukaryotic type
  90S particles
   RNase
    DehaBAV1_0908
Prokaryotic type
  rRNA processing factors
   DehaBAV1_0908
Chromosome and associated proteins [BR:deb03036]
Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     DehaBAV1_0908

SSDB

Motif

Pfam:

Ribonucleas_3_3 Ribonuclease_3 dsrm Rad52_Rad22

Other DBs

NCBI-ProteinID:

ABQ17490

Position

895614..896360

AA seq 248 aa
MYLPNGIILSEMLDLTELENSLGVKFEQPSLLEQALIHTSWVNENPNHSSGSNERMEFLG
DAVLGVIFADRLYHDFPDIQEGDLTRFRSLLVRRESLVRVALGINLGKYLYLGRGEDVSK
GRFKPANLAGAFEAVLAAIYIDKGMDVTREVIFRLFKTEMERVQTLSSNIDYKSRLQELI
QAQLQLTPRYRITNFSGPEHNRLFIAEVYAEDRVFAEGSGRSKKEAETNAAKVALQQFEN
SFTDEDNI

NT seq 747 nt +upstreamnt +downstreamnt
atgtatttgccgaatggcataatcttatctgaaatgttagatttaactgaacttgaaaac
tctctgggagtaaagtttgagcagccatcgcttctagagcaggcacttatacatacttcg
tgggtaaatgaaaaccctaatcactcaagcggctctaacgaaagaatggaatttctgggt
gatgccgttctgggtgttatctttgcagatcgtctttaccatgatttccctgatattcag
gagggtgatttgacccgtttccgttccctgctggtgcggcgggagagtctggtaagggta
gctttgggaataaaccttggcaagtatctctatctggggcggggggaagacgtatccaag
gggcgtttcaaaccggcgaatctggcgggtgcctttgaagcagtcctggcagctatatac
atagataagggtatggatgtaacccgggaagtgattttccgccttttcaagaccgaaatg
gagcgggtacaaacccttagttccaatattgactataaatcccgcctgcaagagcttatt
caggctcaactgcagcttacaccccgctatcgtattacaaatttcagcgggccagagcac
aatcgtttgtttatagcagaggtttatgcagaagacagggtatttgcggaaggttccggg
cgaagcaaaaaagaggccgaaaccaatgccgccaaggtagctctgcaacagtttgaaaac
agctttacagacgaagataacatttga

All links

Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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