KEGG T02279: DCF50

Dehalobacter sp. CF: DCF50_p2126

Entry

DCF50_p2126 CDS T02279

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

dec Dehalobacter sp. CF

Pathway

dec03410	Base excision repair
dec03420	Nucleotide excision repair
dec03430	Mismatch repair
dec03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:dec03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:dec03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:dec03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:dec03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

410661743

NCBI-GeneID:

13835137

UniProt:

K4L6R4

Position

2179293..2180234

AA seq 313 aa
MKLLEVMDPVLSSEIRAGNEWIHQIKWDGIRGISYIEDGRVRIYTKSGRERTSFYPEIQI
APKLLNGHQAVLDGELVVFNTENRPSFHLIMNRERLRNSSNLPVYQQKYPVCYILFDLLF
LNGTDLRSRPLEERQDLLRAKVSSSSDITVTDDFTDGSALFKLMKERNYEGIVSKRKNSR
YQAGKKHNDWFKTKISKKILAIVGGLSWKEQFPNSLLLGIFQGGQYLYIGNASLGLSQKD
FQLLKAYASDYTQESSPFDNLKKMKDTTWLKPVLTCWVSFLEWTDSRSLRHPKILGFSKD
PASEAQGKETIME

NT seq 942 nt +upstreamnt +downstreamnt
atgaaactgctggaagtaatggaccctgtcctgtcatctgaaatcagggcaggtaatgag
tggatccaccagattaaatgggacggtatcagagggatatcctatattgaagacggcaga
gtccggatctacaccaaaagtggcagggagcgaacttctttctatcctgaaatccagata
gctccaaaactgctgaacggccatcaggccgtactggatggcgaactggttgttttcaat
accgagaacagaccatcctttcatctgatcatgaatcgggaacgcctcagaaacagttct
aatctgccagtctatcagcaaaaatacccggtctgctacatcttgtttgatcttttgttc
cttaatggcacagacttgcgtagccggcctctagaagagagacaagatcttcttcgggcc
aaggtgtcatcttcttccgacatcacggttaccgatgattttacggacggttcagctctg
tttaagctaatgaaagaaagaaattacgagggaatcgttagcaagagaaagaacagccgt
taccaggctggcaaaaaacataatgactggttcaaaaccaaaatcagcaaaaaaatcctg
gccattgtcggcggattatcctggaaagagcaatttccaaactcactactgcttggtatc
ttccagggaggccagtacctctacatcgggaatgcgagtcttggactgtcccagaaagac
ttccagcttctcaaggcttacgcttcggattatacccaggaaagcagcccgttcgacaac
cttaaaaaaatgaaggatacgacctggctcaaaccggtcttgacctgctgggtaagtttc
ctggaatggacagacagcaggagtctccgccaccctaagattcttggttttagcaaagat
cctgcctctgaagcccaaggaaaggaaaccatcatggaatga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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