KEGG   Dehalobacter sp. CF: DCF50_p2127Help
Entry
DCF50_p2127       CDS       T02279                                 
Definition
ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1)
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
dec  Dehalobacter sp. CF
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:dec03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:dec03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:dec03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:dec03450]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2180231..2181148
Genome map
AA seq 305 aa AA seqDB search
MNLEFDGKTLNITNPEKLLWPDLGIRKLDYLKILLELAPYLLPHVQDRLLTTIRYPDGFQ
GKSFFQKNIPDYAPGWIPTIEWRDNQYIILESEAILIWLGNQACLEFHIPFNPYDRDQYP
SALVFDLDPSEGQTFEDVTEAALLIFEELKALQITSYIKTSGASGLQIHIPTGGKYDYNT
ARKINEFFAVYFSQKYPRQITLERSVAKRGHKLYFDYLQMWQGKTIISPYSPRATAYASV
AAPLEWQELRHGVKPQDFNLLNISGRLKDKGDLFAPLLNKKNGQDRKNSQDLDFILERIV
AHRQP
NT seq 918 nt NT seq  +upstreamnt  +downstreamnt
atgaacctggaattcgacggcaaaacgctcaatataaccaaccctgaaaaattattatgg
cctgaccttggtatccgcaagcttgattatttgaaaatcctgctggaattagccccgtac
cttctgcctcacgtccaagaccgtctactgacgacgatccgttatcctgatggtttccag
ggcaagtccttcttccagaaaaatatccctgattatgcccctgggtggattccgacgatc
gaatggcgggataatcagtatatcattttagaatcagaagcaatcctcatttggctcgga
aaccaggcgtgtctggaattccacattccatttaacccatatgacagggatcagtatcct
tctgcactggttttcgatctggacccttccgaaggtcagacctttgaggatgtcacggaa
gcggccctgctgatttttgaagagcttaaagcgcttcagattacaagctatatcaaaact
tccggggcaagcggacttcagatccatattccgacaggcgggaagtatgattacaatact
gccagaaaaatcaacgaattttttgcggtttatttcagccagaaataccctcggcaaatt
accctggagcgcagtgtcgccaaaagaggccataagctctattttgactatctgcagatg
tggcagggcaaaaccatcatcagtccatattcaccaagagcaacagcctacgcctccgtt
gccgctccgctggaatggcaagagctgcggcacggggtcaaaccccaggattttaatctg
ctgaatatcagcggcaggctgaaggataaaggggatcttttcgctccgctgcttaataaa
aaaaatggacaagacaggaagaatagccaggatctcgattttatccttgaacggattgtg
gcccacagacaaccctag
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