KEGG   Dehalobacter sp. DCA: DHBDCA_p2475
Entry
DHBDCA_p2475      CDS       T02278                                 
Name
(GenBank) Superfamily I DNA and RNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ded  Dehalobacter sp. DCA
Pathway
ded03420  Nucleotide excision repair
ded03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ded00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DHBDCA_p2475
   03430 Mismatch repair
    DHBDCA_p2475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ded03400]
    DHBDCA_p2475
Enzymes [BR:ded01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DHBDCA_p2475
DNA repair and recombination proteins [BR:ded03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DHBDCA_p2475
   MMR (mismatch excision repair)
    Other MMR factors
     DHBDCA_p2475
SSDB
Motif
Pfam: UvrD_C UvrD_C_2 UvrD-helicase AAA_19 Viral_helicase1 DEAD PhoH SLFN-g3_helicase AAA_16 ResIII nSTAND3 PEP-utilisers_N
Other DBs
NCBI-ProteinID: AFV03502
Position
2519610..2521850
AA seq 746 aa
MERDRLDQDFEIRRLEQVLAIAREQLDCALQKSEENKEAIIAAKLDMWEDTSRSISGLWN
MDNFHELVELSQYANPVSERVSDYERDAAKILALKRLLYSPYFARIDFQFEGEELLEPVY
IGRSSLQDGLTRDMVVYDWRSPIASVFYRFGPGKAFYESPGGKITGEVHLKRQYEIKDGK
LQYFFDADIQIIDEFLRELLSRNASPKMKTIVETIQKDQDLVIRDLEMDLLMVQGAAGSG
KTSVALHRAAYLMYQGLAAKLASNEIVIISPNTLFEQYIANVLPELGEKNVQSLVFEEIF
GKVLQTDSIQSRNQYWESLLSPGQNGGSIAKSSMAFKGSGLFAEILRRFIKDLPYRWLPF
ADIYYDGKIVANRQLLKTKILRGGQEFLLSVRLKQLEASILQIVRELRPSRLEKLKKFIQ
AKPEHEFEVEEGTRRLSILESAALLKKIRSFTELDCPELYRKPFSDKSYFYHLAEGLELP
DCIEEILDYTRENLQKDGLLYDDALALTFLHLHIKGYTAYRDIKQVVVDEAQDYDPLHFE
ILHGLFPKAHYTILGDIHQTIGKQEDSARYEQIGKIFARPKSTLVTLDKSFRSTREILAY
SARFLDQSVKLHSFGRSGDAPAVFVAPNRAALTALLLAEIKTCREKGYQSIGLICKTEYD
ALALYEQLKDQSDIQLLKGDVQFDLSGVFLIPVYLAKGLEFDAVLICEADQEHYHSADDK
NLLYIACTRALHRLNLFYTGEISPLL
NT seq 2241 nt   +upstreamnt  +downstreamnt
ttggaacgggaccgccttgatcaagattttgaaatcagacgcctggagcaggtgctggct
attgcccgggaacaattagactgcgccctgcaaaagagcgaagaaaataaagaggccatt
attgccgcgaagttagatatgtgggaagatacttcccgctccatctccggcctttggaat
atggataattttcatgagcttgtcgagttgagccagtacgccaatccggtgtcggaacgg
gtgtcggattatgaacgggatgccgctaagatcctggctttaaaaagattgctctattcc
ccctactttgctcggatcgattttcagttcgagggtgaggagctgttagagcccgtctat
atcgggcggtcttcgctgcaggacggcctgacccgggatatggttgtctatgactggaga
tctcccatcgccagtgttttttaccgctttggtccggggaaagcgttctatgagtcaccg
ggcggtaaaataacgggagaggtgcatttaaaacgccaatacgagatcaaagatggcaaa
ctgcaatatttcttcgatgcggatattcaaatcattgacgaattcctgcgcgaactgctt
tcccggaatgcttcccctaaaatgaaaaccatcgtcgaaaccatccagaaagaccaggat
ctggtgatccgcgatctggaaatggatttactgatggtccagggagctgcgggaagcggc
aaaacttcggtggcgctgcaccgcgcggcttatctgatgtaccaggggctggcggccaag
ctggcttccaatgagattgtgattatttctcccaacaccctgtttgaacaatacatcgcc
aatgtcttgcctgagctgggcgaaaagaatgtccaatcgctcgtctttgaagaaatattc
ggcaaggttttgcagactgattctatccaaagcaggaatcaatattgggaaagcctgctc
tcccccggccaaaacggcggaagtatcgccaaaagcagcatggccttcaaaggttccggc
ctgtttgctgaaattttgagacgtttcattaaggatttgccttatcgctggctgccgttt
gctgatatttattatgacggaaagattgttgccaaccggcaattgctgaaaactaagatc
ctgagaggcggtcaggaattcctgctgagtgtgcgtttaaagcaattggaagcgtcgatt
ctgcaaatcgtccgtgagctgcgtccgagccgtctggaaaagttaaaaaagttcattcag
gccaagcccgagcatgaattcgaagtggaagaaggtacccggcggttatccattctggaa
agcgccgccttgctgaagaagatacgaagctttaccgagctggattgtccggagctttac
cggaagccgttcagcgataaaagctatttttatcatttagccgaaggtctggagctgcct
gattgtatagaagagattttggactacaccagggaaaacctgcaaaaggatggtttactt
tatgatgacgccctggcccttacttttctccatctccatatcaaaggatataccgcttac
cgtgatatcaagcaagttgtggtcgatgaagcccaggattatgatcccctgcattttgaa
atactccacggtctgtttcccaaagcgcattatacgatcctgggcgatattcatcagacc
atagggaagcaggaagattccgcacgctatgaacagattggcaagatattcgctagacct
aaatccacgctggtgactttggacaaaagcttccgctccaccagggagatcttggcgtac
agcgccaggtttcttgaccaaagcgttaagctccatagttttgggagatcgggagatgcg
cctgccgtgtttgtggcgccgaaccgggcggctctgactgctctcctgcttgcggaaatt
aaaacctgccgggaaaagggttaccaatcaatcgggttaatctgtaaaacggaatacgac
gcccttgccttatatgagcagctcaaggaccaaagcgatattcagctgctaaaaggtgat
gttcaatttgatttaagcggcgtattcctgatcccggtctatctagccaaaggcctggaa
tttgacgccgtactgatctgcgaggccgatcaggagcattatcacagcgctgatgataag
aaccttttatatattgcctgtacgcgggcgctgcatagactgaaccttttttataccgga
gagatcagcccgcttttataa

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