KEGG   Dehalococcoides mccartyi CBDB1: cbdb_A1450Help
Entry
cbdb_A1450        CDS       T00273                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
deh  Dehalococcoides mccartyi CBDB1
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:deh00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    cbdb_A1450 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    cbdb_A1450 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    cbdb_A1450 (trpB)
Enzymes [BR:deh01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     cbdb_A1450 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1143655..1144854
Genome map
AA seq 399 aa AA seqDB search
MPKVDSTGKPGYFGKYGGQFVPEILVPVLNELEQAYEQAKKDETFQSRLKSLSNTFSGRP
TPLYLAERLTEHLGGARIYLKREDLAHTGAHKINNALGQGLLALHMGKKRVIAETGAGQH
GVATAAVCAMLGLECIVYMGEDDIKRQALNVFRMKLMGTEVRSVSSGSRTLKDAINEAMR
DWVSNPETTYYIIGSVVGPRPYPAMVRDFQAVIGQETKAQSLRQLGGLPDCIVACVGGGS
NAMGIFYDFIPDQSVRLIGVEAAGSGISTGKHSATLSAGKVGILHGAMSYLLQDEHGQVI
ETHSISAGLDYPGVGPEHSYLKDNKRVEYVSVTDEEALNGFKLLCSLEGIMPALESSHAI
AHALKIAVGMPKNKNIVINLSGRGDKDMDIVQKAMGVKI
NT seq 1200 nt NT seq  +upstreamnt  +downstreamnt
atgcctaaagtagatagcaccggtaaaccggggtatttcggcaagtatggcgggcagttt
gtacctgaaatactggtgccagtcctaaacgaactggaacaggcttatgaacaagccaaa
aaagacgagactttccagtcacgcctgaaatccctttcaaacaccttttcggggcggccc
actccgctgtatctggcagaaaggctgactgaacatctggggggtgccagaatttacctg
aaaagggaagacctggcccatacaggtgcccataaaatcaacaacgcactcggtcagggg
ctgcttgccttgcatatgggaaagaaaagggtaattgccgaaacaggggcggggcaacac
ggggtagccaccgcagctgtttgcgccatgctggggctggaatgcattgtctatatgggc
gaagatgacatcaaacgtcaagccttgaacgtattccgcatgaagctgatgggaacggaa
gtcagaagcgtatcttcgggcagccgtaccctgaaagacgccatcaatgaagctatgcgt
gactgggtaagcaacccggagaccacttattatataatcggttcggtggtcggcccgcgc
ccttatccggctatggtacgggattttcaggcagttatcgggcaggaaaccaaagcccag
tccttaagacagctggggggactacctgactgcattgttgcctgtgttggcggaggcagc
aatgccatgggtattttctatgatttcataccagaccaaagcgtacgtcttatcggggtg
gaagctgccggcagcggcatcagcaccggcaaacattcggccacccttagtgccggcaag
gtgggtatactccacggcgccatgtcctacctgcttcaggacgagcatggacaggtgatt
gaaacccacagtatttcggccgggctggattatcccggcgtaggacctgaacacagctac
ctgaaagataataagcgggtggaatatgtttcggtcacagatgaagaagccctgaacggc
ttcaaactgctatgctcgctggaagggataatgcctgctctggaatcttcccacgccatt
gcccatgccctgaaaatagcagtcggcatgccgaaaaacaaaaatatagtcataaacctc
tccggcagaggggacaaagacatggatattgttcaaaaagcaatgggggtaaagatatga

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