KEGG   Delftia sp. Cs1-4: DelCs14_1287
Entry
DelCs14_1287      CDS       T01497                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
del  Delftia sp. Cs1-4
Pathway
del03030  DNA replication
del03410  Base excision repair
del03420  Nucleotide excision repair
del03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:del00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DelCs14_1287
   03410 Base excision repair
    DelCs14_1287
   03420 Nucleotide excision repair
    DelCs14_1287
   03440 Homologous recombination
    DelCs14_1287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:del03032]
    DelCs14_1287
   03400 DNA repair and recombination proteins [BR:del03400]
    DelCs14_1287
Enzymes [BR:del01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DelCs14_1287
DNA replication proteins [BR:del03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DelCs14_1287
DNA repair and recombination proteins [BR:del03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DelCs14_1287
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DelCs14_1287
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: AEF88319
Position
1458821..1461664
AA seq 947 aa
MSNSKTLVLIDGSSYLYRAYHAMPDLRAEPGNPESPATGAIRGMINMLQAIRKEVAADYA
VCVFDTSGPTFRDTLYPEYKAHRSPMPDDLRSQIEPIHEVVRLLGWPVLAIQGVEADDVI
GTLAKTAAAQGVNVVISSGDKDLSQLVDSHIMVMDTMSGKRRDVAGVTAEFGVPPTQMID
YQALVGDAVDNVPGVSKVGPKTAVKWLAEHGSLDGLIAAADGIKGVAGQNLRDAIASGQL
ALSRQLVTMKTDCDLTAEVPTLPVLDALAPREPDTAPLRDFYERYGFKGLARMLGGAAPE
PDALEAVKAGRKPAAKPRADQSTGDMFAQEQAESDDATTEAEAVQQRPLDYDVVLTWEAF
DQWLAKINAAELTALDTETTSLDEMRAEIVGISLSVEPGAAAYIPLRHAGPDAPEQLPAD
EVLQRLKPWLEDAARPKLGQHVKYDRHVFANAGIEVQGYVHDTMLQSYVLEVHRPHGLAS
LALRHTNRTGISYEDLCGKGAHQIPFAQVPVDKAAAYACEDADQTLDVHRVLWPQLQAND
GLRGVYELEIATSEALFRIERNGVLIDAATLAKQSNDLGQRIVQLEQEAYDIAGQPFNLA
SPKQLGEIFFDKLGMPVVKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRSLSKLKGTYT
DKLAQLALPRTGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFIAAPGHVI
ASADYSQIELRIMAHLSGDESLLRAFHEGRDVHRATASEVFNVELEQVSSEQRRYAKVIN
FGLIYGMSSFGLAKNLGIETKAAAAYIDRYFQRYPGVKRYMDETVEFARDHGYVETVFGR
RLYLVDINGGSGPRKKAAERQAINAPMQGTAADLIKKAMVAVQAELDARQSEVRVIMQVH
DELVFELPEGESDWVRTEIPRLMAGVADLKVPLLAEVGLGPNWDKAH
NT seq 2844 nt   +upstreamnt  +downstreamnt
atgagcaattccaagaccctggtgctgatcgacggctccagctacctctaccgcgcctac
cacgccatgccggacctgcgcgccgagcccggcaacccggaaagccctgccacgggcgcc
atccgcggcatgatcaacatgctccaggcgatcaggaaggaagtggcggccgactacgcc
gtctgcgtgttcgataccagcggacccaccttccgcgacacgctctaccccgaatacaag
gcgcaccgctcgcccatgcccgacgatctgcgctcgcagatcgagcccatccatgaagtg
gtccgcctgctgggctggcccgtgctggccatccagggcgtggaggccgacgacgtgatc
ggcaccctggccaagacggccgccgcccagggcgtgaacgtggtgatctccagcggcgac
aaggacctgtcccagctggtggactcccacatcatggtgatggacaccatgagcggcaag
cgccgcgacgtggccggcgtgacggccgagttcggcgtgccgcccacgcagatgatcgac
taccaggccctggtcggcgatgccgtggacaatgtgcccggcgtgtccaaggtgggcccc
aagacggccgtcaagtggctggccgagcacggctcgctcgacggcctgattgctgcggcc
gacggcatcaagggcgtggccggccagaacctgcgcgatgccatcgcctcgggccagctg
gcgctgagccgccagttggtcaccatgaagaccgactgcgacctgaccgccgaagtgccc
accctgccggtgctcgacgcgctggcgccgcgcgagcccgataccgcgccgctgcgcgac
ttctatgagcgctacggcttcaagggcctggcgcgcatgctcggcggtgccgcgcccgag
cccgatgcgctggaagccgtcaaggccggccgcaagccagcggccaagccgcgtgccgac
cagtccacgggcgacatgtttgcccaggagcaggccgaatccgacgacgccaccaccgag
gccgaggccgtccagcagcgtccgctggactatgacgtggtgctgacctgggaagcgttc
gaccagtggctggccaagatcaacgccgccgaactcacggccctggataccgaaaccacc
tcgctggacgagatgcgtgccgagatcgtgggcatctcgctgagcgtggagcccggcgcc
gctgcctacatccccctgcgccatgccggccccgacgcgccagagcaactgccggccgac
gaggtgctgcagcgcctcaagccctggctggaggatgcggcccggcccaagctgggccag
cacgtcaagtacgaccgccatgtcttcgccaatgccggcatcgaggtgcagggctatgtg
cacgacaccatgctgcaaagctatgtgctggaagtgcaccgcccgcacggcctggccagc
ctggcgctgcgccacaccaaccgcacgggcatcagctatgaagacctgtgcggcaagggc
gcccaccagatcccgttcgcccaggtgcccgtggacaaggctgccgcctatgcctgcgag
gatgccgaccagaccctggatgtgcaccgcgtgctgtggccgcagctgcaggccaacgac
ggcctgcgcggcgtctacgagctggagatcgccaccagcgaggccctgttccgcatagag
cgcaacggcgtgctcatcgatgccgccacgttggccaagcagagcaacgacctgggccag
cgcatcgtgcagctggagcaggaggcctatgacatcgcgggccagcccttcaacctggcc
agccccaagcagctgggcgaaatcttcttcgacaagctgggcatgcccgtggtcaagaag
acggccaccggcgcacgcagcaccgacgaagaggtgctggagaagctggccgaggactat
ccgctgcccgccaagctgctggagcaccgcagcctgtccaagctcaagggcacctatacc
gacaagctggcccagctggcgctgccgcgcacgggccgcgtgcacacgcactacgcccag
gccgtggccgtgacggggcgcctgtccagcaacgaccccaacctgcagaacatccccatc
cgcacgcccgaaggccggcgcgtgcgcgaggccttcattgccgcgcccggccatgtgatc
gccagcgccgactactcgcagatcgagctgcgcatcatggcccacctgtcgggcgacgag
tccctgctgcgcgccttccacgaaggccgcgacgtgcaccgtgccacggcatcggaagtc
ttcaacgtggagctggagcaggtcagcagcgagcagcgccgctatgccaaggtcatcaac
ttcgggctgatctacggcatgagcagctttggcctggccaagaacctgggcatagagacc
aaggccgcggccgcctacatcgaccgctatttccagcgctatccgggcgtcaagcgctac
atggacgagacggtggaattcgcgcgcgaccacggctacgtggaaaccgtcttcggccgc
cgcctgtacctggtggacatcaacggcggcagcggcccgcgcaagaaggcggccgaacgg
caggccatcaacgcgcccatgcagggcacggcggccgacctgatcaagaaggccatggtg
gcggtgcaggccgagctcgatgccaggcagtccgaggtccgcgtcatcatgcaggtgcac
gacgaactggtgttcgagctgcccgaaggcgagtcggactgggtgcgcaccgagatcccg
cgcctgatggccggcgtggccgacctgaaggtgccgctgctcgccgaggtgggcctggga
cccaactgggacaaggcacattga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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