KEGG   Candidatus Doolittlea endobia: MHIR_DE00610
Entry
MHIR_DE00610      CDS       T04480                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
den  Candidatus Doolittlea endobia
Brite
KEGG Orthology (KO) [BR:den00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:den03032]
    MHIR_DE00610 (gyrB)
   03400 DNA repair and recombination proteins [BR:den03400]
    MHIR_DE00610 (gyrB)
Enzymes [BR:den01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     MHIR_DE00610 (gyrB)
DNA replication proteins [BR:den03032]
 Prokaryotic type
  DNA Topoisomerases
   MHIR_DE00610 (gyrB)
DNA repair and recombination proteins [BR:den03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MHIR_DE00610 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim GyrB_hook HATPase_c HATPase_c_3 Toprim_4
Other DBs
NCBI-ProteinID: CUX96849
UniProt: A0A143WVC5
Position
I:complement(717181..719595)
AA seq 804 aa
MLNSYDSSSIKVLKGLDAVRKRPNMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKEIM
VKIYEDNSVSVQDDGRGIPTGIHEQEDVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELIIKREGKVYRQTYYAGVPQSPLKVIGETNKTGTTVRFWPSFDTFTNNT
EFQYEILAKRFRELSFLNSGVSIRLHDKRNDKEDHFHYEGGIKAFVEYLNKNKTPIHQGV
FYFSNEKDSIGVEIALQWNNGFQENIYCFTNNIPQRDGGTHLAGFRAALTRTLHSYMDKE
GYSKKAKISATGDDAREGLTAVVSVKVPNPKFSSQTKDKLVSSEVKPAVESLMNERLVEY
LLENPNDAKIIVGKIIDAARAREAARKAREMTRRKGALNLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVAALITVLGCGIGR
DEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVFIAQPPLYKVKKG
KQEQYIKDDEAMDQYQIALAIDGAMLHANANAPALDGQLLENLVIEHCAVQKMILRMERR
FPRALLYHLIYQPSLTEAQLSQQDQIISWMASLVQVLNDHEQYGSRYTYKVQENRERQVF
EPLLQVRTHGIDTAYLLDYDFIHSGEYRKLTTLGETLGDLLKEDAYIERGERRQPVTSFE
QALEWLMQESRRGLVVQRYKGLGEMNPEQLWETTMNPINRRMLHVTVKDTISADQLFTTL
MGDEVEPRRAFIEENALKAANIDI
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgttgaattcttatgactcttcaagtatcaaagtactcaaggggttggacgctgtacgt
aagcgcccgaatatgtatatcggagataccgatgatggcaccggtctgcatcatatggtg
tttgaggttgtagataacgctattgatgaagccttagctggttactgtaaagaaattatg
gtcaagatctacgaagataattcggtttccgtgcaggatgatggacgcggcattccgacc
ggcatccacgaacaagaagacgtctctgctgccgaagttattatgaccgtactgcacgcg
ggtggaaagtttgacgataactcctataaagtgtcaggcggtctgcatggtgtcggtgtg
tcagtggtaaacgctctgtcggaaaaacttgaactaataattaaaagagaaggtaaagtt
tatcggcaaacctactatgctggcgtgccacaatcacctttaaaagtgataggtgaaaca
aataaaaccggcactaccgtgcggttctggccgagctttgataccttcacgaataacact
gaatttcaatacgaaatcctagccaagcgatttcgggaactatcttttctgaactccggc
gtatctatacgtttgcacgataagcgcaacgataaggaagatcactttcattatgaaggt
ggtatcaaggctttcgtggaatatttgaataaaaacaagacacctatccaccagggtgta
ttctatttttcaaatgaaaaagacagtattggtgtggaaatcgcgctgcaatggaataac
ggttttcaagaaaatatttactgctttaccaataatattccccaacgcgacggcggtacc
catctagccggctttcgtgctgcactgactcgcacgctgcattcctatatggataaagaa
ggctacagtaaaaaggccaagatcagcgcgactggtgatgacgctcgcgaaggacttacc
gccgtggtttctgttaaggtcccgaatccgaagttctcatctcaaaccaaagacaaactg
gtttcgtccgaagtaaaaccggcggtggaatcactgatgaacgaacggctagtagaatat
ttactggaaaaccctaacgatgcaaaaattatagtggggaaaattatcgatgctgcccgt
gcccgtgaagctgctcgcaaagcgcgcgagatgactcgccgtaagggagcgctaaatcta
gcgggcctgccgggcaagttagcggattgccaggagcgtgacccggcgctgtcggagctt
tacctggtggagggtgactccgccggcggctcggccaaacaaggtagaaaccgtaagaat
caggcgatattgccgttgaaagggaaaatcctcaacgtcgaaaaggcccgtttcgacaaa
atgctctcttcccaagaagtcgctgccctcataaccgtccttggctgtggcatcggccga
gacgaatataatccggataagttacgctatcacaatattattattatgactgatgccgat
gttgatggctcgcatattcgcactctacttttgactttcttttatcgtcaaatgccggaa
attatcgagcgcggccatgtatttatcgcccaaccgccgctttataaagtcaaaaagggt
aagcaagagcaatatattaaagacgatgaagccatggatcagtatcaaatagcgttagca
atagatggtgccatgctacacgctaacgcgaatgctccggcgctggatggacaactgtta
gaaaatctagtgatcgaacattgcgccgtacaaaaaatgatcctccgcatggaacgccgt
ttcccgcgtgcgttgctttatcacttgatttatcagccgtctctgactgaagcgcaatta
agtcaacaggatcaaatcataagttggatggcctctctggtgcaagtactgaacgatcat
gagcagtatggtagtagatacacttataaagtacaggaaaatcgtgaacgccaagtgttt
gagccgttgcttcaggtgcgaacgcatggcatcgatacggcttacttgctggattacgac
tttatccatagcggtgaatatcgcaaactgacgacgcttggcgaaacgctaggtgatctt
cttaaagaagatgcttatattgagcgaggggagcggcgtcagccggttactagctttgag
caagcgctggaatggctgatgcaagagtcgcgccgtggcttggtggtgcagcgctataaa
ggtttaggcgaaatgaatcccgagcagctatgggaaacgactatgaatccaatcaaccgt
cgtatgttgcacgtcacggtaaaggacaccatttcagctgatcagctgtttactacgcta
atgggggacgaggtagagccacggcgtgcgtttatagaagagaatgctttaaaagccgcc
aatattgatatataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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