KEGG   Devosia sp. H5989: XM25_01525
Entry
XM25_01525        CDS       T04003                                 
Name
(GenBank) Ribonuclease HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
deq  Devosia sp. H5989
Pathway
deq03030  DNA replication
Brite
KEGG Orthology (KO) [BR:deq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    XM25_01525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:deq03032]
    XM25_01525
Enzymes [BR:deq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     XM25_01525
DNA replication proteins [BR:deq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     XM25_01525
   Elongation factors (archaeal)
     XM25_01525
SSDB
Motif
Pfam: RNase_HII ID
Other DBs
NCBI-ProteinID: AKR54508
Position
293906..294571
AA seq 221 aa
MLAHMPKPDSPVVVIKPSLRHERAALKAGATIVAGVDEAGRGPLAGPVVVAAVILDHRRV
PKGLDDSKRLTAEIREELFAEIVAKATVSVVAAPPAIIAARNIRGATLWAMTRAVLNLSM
APDHVLVDGRDVPPGLPVTGQAIIDGDALSVSIAAASIIAKVTRDRMCQIMHRDTPDFGF
AGHKGYSTPEHLKALKTFGPSRHHRMDFAPCIAAAERTLFD
NT seq 666 nt   +upstreamnt  +downstreamnt
atgctggcgcacatgcccaagcccgattctcccgttgtcgtcataaagccctcgctccgc
catgaacgcgcggcgctcaaggctggcgccaccatcgtggcgggggtcgatgaggcgggc
cgcgggccgctggcgggaccggtcgtcgtcgccgcggtcatcctcgatcatcggcgcgtc
cccaaggggctcgacgattccaagcggctgacggccgagatccgcgaggagctcttcgcc
gagatcgtggccaaggcaacggtgtcggtggtggcggctccgccagcgatcatcgccgcc
cgaaacatccgcggcgcgaccctctgggccatgacccgcgccgtgctcaatctctccatg
gcgcccgaccatgtcctggtggatggcagggatgtgccgcccggcctgccggtcaccggc
caggccatcatcgatggcgatgcgctttccgtctcgatcgccgccgcttctatcatcgcc
aaggtcacgcgcgaccgcatgtgccagatcatgcatcgggacactcccgatttcggcttt
gccggacacaagggctattccacccccgagcacctcaaggctctcaagaccttcgggccc
tcgcgccaccaccgcatggattttgccccgtgcattgcggcggccgaacgcaccctcttc
gattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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