KEGG T04368: DBW

Desulfuromonas sp. DDH964: DBW_2429

Entry

DBW_2429          CDS       T04368

Name

(GenBank) exodeoxyribonuclease VII large subunit

K03601

exodeoxyribonuclease VII large subunit [EC:3.1.11.6]

Organism

deu Desulfuromonas sp. DDH964

Pathway

deu03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:deu00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    DBW_2429
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:deu03400]
    DBW_2429
Enzymes [BR:deu01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     DBW_2429
DNA repair and recombination proteins [BR:deu03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     DBW_2429

SSDB

Motif

Pfam:

Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon RecJ_OB

Other DBs

NCBI-ProteinID:

AMV72766

UniProt:

A0A143B8M2

Position

complement(2572590..2573789)

AA seq 399 aa
MDQTAPRLTVSRLVALLRETVEDNFVQVLVEGELSNFAAPASGHWYFSLKDEQAQLRAVM
FRTQNRLLRFQPENGLQVVCSGRVSVYNQRGELQLIVDTLHPLGAGGLQLAFEQLKGRLA
AEGLFAAERKRPIPGHPVMVGVVTSATGAAIHDILNVLQRRAAGVRVLLRPVRVQGEGAA
EEIAAAIEDLNRHGRAEVLIVGRGGGSLEDLWAFNTEVVARAIAASGLPVISAVGHETDL
TIADFVADLRAPTPSAAAELVVASRLELERHLDHLVLRLGAQIDSRLGLLRERLTGLQRR
LRSPLADLALSRQRQLALEQRLYLAWQSRWQEYSGRLAVLGTRLDLLSPLRTLQRGYAIA
LRESDGRAVVDAATLVPGEGLRLHLARGKVRVVVAEEGE

NT seq 1200 nt +upstreamnt +downstreamnt
atggatcagacagcgccgcgtttgaccgtttcccgactggtagcattgctgcgggagacc
gtcgaagacaattttgtccaggtcctggtcgagggggagttgtccaattttgccgcaccg
gcttcggggcactggtatttttccctcaaggatgagcaggcccagctgcgtgcggtcatg
tttcgcacccagaaccggctgctccgcttccagccggaaaacggcctgcaggttgtctgc
agtggccgggtctcggtgtacaaccagcgcggggagttgcagctcatcgtcgataccctg
catcccctcggcgccggagggttgcagctcgccttcgagcaattgaagggacgtctcgcg
gcggaggggctctttgccgcggagcgcaagcggccaattcccgggcatccagtgatggtc
ggagtggtcacctcggcgaccggcgccgcgatccatgacattctcaacgtcttgcagcgc
cgcgccgccggagtgcgggtgctgctccgcccggtgcgggtccagggggagggtgcggcc
gaggagattgccgccgcgatcgaggatctcaaccggcatggccgcgccgaagtcctgatc
gtcggtcgcggcggcggctcgctggaagacctctgggccttcaataccgaggtggtagca
cgggcgatcgcggcctcagggttgccggtgatctctgcggtcgggcatgaaaccgacctc
accatcgccgactttgtcgccgacctgcgcgcgccgacaccgagcgctgcggccgagctg
gtggtcgccagccgccttgaactggagcgccacctcgaccacctggtgttgcggctcggc
gcccagatcgacagccggcttggcctgttgcgggagcggctgacgggtctgcagcggcga
ctgcgctcccccctcgccgacctggcgctgtcgcggcaacggcagctcgccctcgagcag
cggctctacctggcctggcaatcccgctggcaggagtactccgggcggctcgcggttctc
ggcactcgcctcgatctcctctcaccgctgcgaacgctgcagcgcggctatgccatcgcc
ttgcgggaaagcgacggacgggctgtcgtcgatgccgccaccctggtaccgggcgaggga
ttgcggctccacctggcccggggaaaggtgcgggtggtggtcgcggaggagggggaatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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