KEGG   Cavenderia fasciculata (cellular slime mold): DFA_02273
Entry
DFA_02273         CDS       T02668                                 
Symbol
rfc4
Name
(RefSeq) replication factor C subunit
  KO
K10755  replication factor C subunit 2/4
Organism
dfa  Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03030  DNA replication
dfa03410  Base excision repair
dfa03420  Nucleotide excision repair
dfa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dfa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DFA_02273 (rfc4)
   03410 Base excision repair
    DFA_02273 (rfc4)
   03420 Nucleotide excision repair
    DFA_02273 (rfc4)
   03430 Mismatch repair
    DFA_02273 (rfc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dfa03032]
    DFA_02273 (rfc4)
   03036 Chromosome and associated proteins [BR:dfa03036]
    DFA_02273 (rfc4)
   03400 DNA repair and recombination proteins [BR:dfa03400]
    DFA_02273 (rfc4)
DNA replication proteins [BR:dfa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    DFA_02273 (rfc4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    DFA_02273 (rfc4)
Chromosome and associated proteins [BR:dfa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    DFA_02273 (rfc4)
DNA repair and recombination proteins [BR:dfa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     DFA_02273 (rfc4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    DFA_02273 (rfc4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 Mg_chelatase AAA_11 RuvB_N AAA_16 DEAD AAA_24 AAA_30 AAA_14 ResIII SLFN-g3_helicase AAA_23 AAA_5 AAA_19 DNA_pol3_delta DUF815 AAA_assoc_2 Gp44_lid bpMoxR AAA_25
Other DBs
NCBI-GeneID: 14871181
NCBI-ProteinID: XP_004366663
UniProt: F4PZ01
Position
Unknown
AA seq 358 aa
MFYNKSTGKNTSNSAPSIGSGGIQKAPEPWVSKYRPRTVDDVAHQDEVVRALKKSLDGGA
LPHLLFYGPPGTGKTSTILAIAMDLYGPDLIKDRVLELNASDERGIEIVRTKIKNFASFT
VNNTTVAGKQVPSFKLIILDEADSMTQDAQAALRRTIENTSKTTRFCLLCNYITRIIEPL
SSRCAKFRFKPLKSEAMGERLKYIADQEGVNLANESTLDAIHTVSQGDMRKAITFMQSAH
RFYASKSITDANIYDISGSVEPKTLELFINSCKSGDFYKVRHLVERVMALGYPASQIISQ
LFDIVVQPSIHFNNIQRTKIAIKIGQIDRNLVDGSDEFLQLFDLGAYMMKCFDEMEMN
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgttttataacaagtcaacaggaaagaatacatcaaatagtgcaccatctatagggtct
ggtggtatacagaaagcccctgaaccttgggtatcaaaatatcgaccaagaacagtagat
gatgtagcacatcaagatgaagttgttcgtgcattaaagaaatcattggatggtggagct
ttaccacatttattattctatggaccaccaggtacaggaaagacatcaactattcttgct
attgctatggatttatatggacctgatttgattaaagatagagttttggaattgaatgcc
tcagatgaaagaggtatcgagattgttagaacaaagattaagaattttgcttcatttact
gttaataatactactgtcgcaggaaaacaagtaccatcatttaaattgattatattggat
gaagcagattcaatgacacaagatgcacaagcagcattacgtagaactatagaaaataca
agcaagacaactagattctgtttattgtgtaactatatcactagaatcattgaaccattg
tcatctcgttgtgcaaagtttagattcaaacctctcaaatcagaggcaatgggtgaaaga
ttaaaatatattgccgaccaagaaggtgtcaacttggccaatgaatctacactcgacgct
attcacactgtttctcaaggtgatatgcgtaaagctatcacttttatgcaatctgctcat
agattttatgcttcaaaatcaattactgatgctaatatttatgatatttctgggtctgta
gaaccaaaaacattagaattatttatcaattcatgcaagtctggtgatttttacaaggtt
agacatttagtagagagggtgatggcacttggatatccagcatcacaaattatttcacaa
ttgtttgatatcgtagttcaaccttctatacattttaacaatatacaaagaactaaaata
gcaatcaagattggacaaatcgatagaaaccttgtcgatggatcagatgaattcttacaa
ctattcgatttgggtgcatatatgatgaaatgttttgatgaaatggaaatgaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (24)   
   Pfam (24)   
All databases (52)   

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