KEGG   Cavenderia fasciculata (cellular slime mold): DFA_07628
Entry
DFA_07628         CDS       T02668                                 
Symbol
polA
Name
(RefSeq) mitochondrial DNA polymerase A
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
dfa  Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03030  DNA replication
dfa03410  Base excision repair
dfa03420  Nucleotide excision repair
dfa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dfa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DFA_07628 (polA)
   03410 Base excision repair
    DFA_07628 (polA)
   03420 Nucleotide excision repair
    DFA_07628 (polA)
   03440 Homologous recombination
    DFA_07628 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dfa03032]
    DFA_07628 (polA)
   03400 DNA repair and recombination proteins [BR:dfa03400]
    DFA_07628 (polA)
Enzymes [BR:dfa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DFA_07628 (polA)
DNA replication proteins [BR:dfa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DFA_07628 (polA)
DNA repair and recombination proteins [BR:dfa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DFA_07628 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DFA_07628 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc CAP DNA_pol_A_exo1 HUN
Other DBs
NCBI-GeneID: 14869918
NCBI-ProteinID: XP_004355124
UniProt: F4Q2H1
Position
Unknown
AA seq 1855 aa
MKLNIKSLGLVLILIINQSYGQTVSFDATYQLSLVNAIRAQAGKAALSLSPCLVQSAQFQ
SNYQANSNQMTHDNPAGDALVRMSSFTANSLTSAGENVAAGYYNDDDVVAAWRQSPGHYA
NMIGDFLYFGCGMAASSTNQVVYWTQNFAIYSSCSSQTTGGSTSTTSSTSATGTSSTTTS
PTSATSSTTTGATSDPITSTSATTTDSISTTGPGVTSTTTGSVTSATGTSSTTTSPTSAT
SSTTGATSDPITSTSATTGSLSTDQSTTTTTTIAADTTTQGSTTTGTGTTSDPISTTSGT
STSSSSSSSEDPIISTTGSTTGSSSADQPTTSSDSTTTPDDSTTTSDEDSSSATKMGSSA
EKSGSNTDTDSSTSIESSGSTDDNVDSNSASVDSSSIDSSSSSSSTTNNDSNSDSSTLGS
SNNDDQNADSQQRGTSSAETAGSLDNNNMGEDGGNSSMGAQLYKPYMIIATLMIVSVGVR
FIVIVQPTSLSITNQHHRLYCTNNNNDNNSSSNKTTPRKYTIKGNLISSSSLSNSIPPSV
DNSEPTATTTTKKKKVVNIRIKSKDPFIDIGGNNKVYLRKPKNTTTPVLDTTQLNIDNNN
NTDNLQQVNSSSIITDLLEIENNNPRNLKSIEEDISLSTSPQPLSSSPSSFISASESSNS
IEPIKEEQQVIGQQQQEEEEMKNSILRLKEINISQDFKATPTQVAEAQQKKKAAIAKSKR
KKDEDKDDFIDDSEELMEQLDDDITTSTLTTSSTTTTTNNNKNEEKQKLNLDQNNNHVVI
IDGTPLAYKAYNTISGLTHNGEPIGALFGFTKALLKILKELKPDYVLVCFDPTDGAGNFR
HDIYEKYKANRPSTPLDLKQQLPLLPQVCTALGIEYAKQSRFESDDLIATYANIVEQANK
KLAAGNDNLVVDGQQQQQQKYRATIVSDDKDMLQLVSDDVHIYNTRTNSIFCHQDVIDKM
GVPSHLITSFQALAGDSVDNIPGVPSLGPKSASAIINSLGHIDNVLANIEQIPLKFREKV
RNNSEQIKISYQLATLSKQAETKVPLEGLKWNPVNKLQFVEFLDKYNFNNIKGKLDNLGL
VYEGEENKEISQSSSSSSSSSSAYTIDPDYVLTDEEVKDYLPNDVTCVNTVEHAREIDVY
HACDTEVIDIDVKEQSPIGHGKIICFSIYCGPDIDFGTGSRIWVDILGSNGDEILQIFKE
YFEDESIFKVWHNYAFDRHVFYNHNIDVVGFGGDTMLMARLWDASRMMRGGYSLEGLTKD
LLDKHKTNMDDLFGQPKLKSDGTPGKGIILPPLEHLQRSSKHLTKWIEYSSRDAEVTWML
RENLHKKLMTMEWIGPNSNMWDFYYMMWRPFGQLLTDMERRGMKVDLEHLKGVEVIAQRD
ITEHNENFRRWALGYCENVKHMNIDSDAQVQQFLFAPCRNVKTKEEMAREEEFERENVDG
IIEEGAKKAKKKIGFKLAGLGLPVPGVTNSGWPSVDAASLRLLSGKDPANGKYGTAYNHF
AVDRLPPNATEEEIEKAKEEGRQACLAIASLLEVGSIGTLISSFIIPLQRLADSNHRLHT
SVNVNTETGRLSSRRPNLQNQPALEKDRYKIRKAFTCEPGNTLVVADYGQLELRLLGHIT
NCKSMLDAFRVGGDFHSRTAMGMYPHVRAAVDAGEVLLEWDGEGAPPKPLLKDKFASERR
KAKTLNFSIAYGKTAHGLSKDWNVTLSEAQNTLNRWYEDRPEVLLWQRSTIQIAHQKKWT
RTLMGRYRLLPDIDSKARGFVGHSERASINTPLQGGAADIVMKAMLIIEQDARLKELGYR
LIMQIHDELILEGPEEHAPEARDIVIKLMGNPLNKPLLVDLVVDCRFAKTWYEAK
NT seq 5568 nt   +upstreamnt  +downstreamnt
atgaagttaaatatcaaatcattaggattggtcctgattttaattattaatcaatcatat
ggacaaactgtatcatttgacgctacctatcagttatctttggtcaatgcgattagagcc
caggctggtaaagcagctctatcattaagcccttgtcttgtacaatctgcacaattccaa
tcaaactaccaagccaattccaatcaaatgactcatgataacccagctggtgatgccctg
gtaagaatgagttcttttactgccaattcactcacttctgcaggagaaaatgttgcagct
ggatactataatgacgatgatgttgttgctgcttggagacaatcgccaggacattatgca
aatatgattggagattttctatattttggttgtggaatggctgcttcgagtaccaaccaa
gtggtgtactggacccaaaattttgcaatctattcatcttgtagctctcaaaccactggc
ggttcgacatcaactacgtcttcaacctctgcaactgggacatcttcaacaaccacttct
cccactagcgcaacttctagtactactactggagcaacttctgatccaatcacatcaacc
tctgctaccacaactgattctatttccactactggacctggagtaacctccacaacaact
ggctctgtcacctctgcaactgggacatcttcaacaaccacttctcccactagtgcaact
tctagtactactggagcaacttctgatccaatcacatcaacctctgctacaaccggatct
ttatcaacagaccaatccaccaccactactactactatcgccgctgacactaccacccaa
ggttcaaccacgactggaactgggacaacatctgatccaatctctactactagtggtaca
tctacttcttcttcttcttcttcttccgaggatccaatcatatcaacaacgggatctacc
actggatcttcgtcagccgatcaaccgaccacatctagtgattctacgaccacacctgat
gactctacgactacatctgatgaagatagcagctcggccaccaagatgggttcttcagct
gagaagagtggcagtaatacagatacagactcgagcacatctattgaatctagtggcagc
actgatgacaatgtcgatagtaattctgcttctgtcgatagtagcagtattgattcatca
tcatcatcatcatcaacaaccaacaatgacagcaacagcgatagtagtactttgggaagt
agcaataatgatgaccaaaatgcagacagccaacagagaggaacatcatctgccgaaaca
gcaggcagcttggataataataatatgggtgaagatggtggtaactcttcgatgggagca
cagttgtacaaaccatatatgatcattgcaactttaatgatcgtatctgtcggtgttcgt
tttatagtcattgttcaaccaacttcactaagtatcactaatcaacatcatagattatat
tgtacaaataacaacaacgacaacaatagtagtagtaataaaacaacaccaagaaagtat
actatcaaaggtaatttgatatcatcatcatctttatcgaattcaataccaccatcagtt
gataattcagaaccaacagcaacaacaacaacaaagaaaaagaaagtagtaaatattaga
atcaagtcaaaagacccttttatagatatcggaggtaataataaagtatacctcaggaaa
ccaaagaatactacaacaccagtactagacaccactcaactcaatatcgataataataac
aatacagataatcttcaacaagtaaatagtagtagtattattacagatttattagaaatc
gaaaataataatccaagaaatttaaaaagcatagaggaagatatttcactttccacttca
ccacagccactttcatcgtcaccatcttcatttatctctgcatcagagagtagtaatagt
attgaaccaataaaagaagaacaacaagtaattggtcaacaacagcaagaagaggaagaa
atgaaaaatagtatattgagattaaaagaaattaatatcagtcaagatttcaaagctaca
ccaacacaagtagcagaagcacaacaaaagaaaaaggctgcaattgctaaaagtaaaaga
aagaaagatgaagacaaggatgattttatagatgactctgaggagcttatggaacaacta
gatgatgacatcaccacttcaactttaactacctcatcgactacaacaacaaccaacaac
aacaagaatgaagaaaaacaaaagttaaatttggatcaaaataataatcatgttgtcatt
attgatggtacaccattggcatacaaagcatataataccatttcaggactcacacacaat
ggtgaaccaattggtgcattgtttggctttaccaaggcattactcaaaatactcaaagaa
ttgaaaccagactatgttttggtttgtttcgatccaactgatggtgccggtaattttaga
catgacatttatgaaaaatacaaagccaatagaccatccactcctttggacctcaaacaa
caattacctctattgccacaggtttgcactgctctcggaatcgaatatgccaaacaatca
agattcgaatctgatgatttgattgctacctatgccaacattgtagaacaagcaaacaaa
aagttggcagctggaaatgataatcttgttgtcgatggtcaacaacagcagcaacaaaaa
tatagagctacgatcgtatcagacgataaagacatgttgcaattggttagtgacgatgtt
catatttataatactagaacaaactctatcttttgtcatcaagatgttattgataaaatg
ggtgtcccaagtcatttaattacatcattccaagcattggctggtgattctgttgataat
attccaggtgtaccatcattgggtccaaaaagtgcaagtgctatcatcaactctcttggt
catattgataatgtactagcaaatattgaacaaattccattaaagtttagagaaaaggtt
agaaataattcagaacaaattaaaatttcttatcaattggcaacactaagtaaacaagca
gagacaaaagtacctttggaaggattaaaatggaatcctgtcaacaaacttcagtttgta
gaatttttagataaatataattttaataatattaaagggaaattggataatctaggatta
gtttacgagggagaagaaaataaggaaatttcacaatcgtcgtcatcatcatcatcatca
tcgtcagcctatactatcgatccagattatgtattgacagacgaagaggtaaaggactat
ttaccaaatgatgtgacatgtgtcaatacagtagaacatgcaagagaaattgatgtatat
catgcatgtgatactgaagtcattgacattgatgtaaaggaacaatcacctattggacat
ggaaagattatttgtttctctatttactgtggtcccgacattgattttggaacaggatca
cgtatttgggtagacattttaggaagcaatggtgatgaaatactgcaaatatttaaagaa
tactttgaagatgaatcgattttcaaagtatggcacaactatgcatttgacagacatgtt
ttctacaaccacaacattgatgttgttggatttggaggtgataccatgctgatggcacgt
ctatgggacgcctctagaatgatgcgtggtggttattcactcgaaggtctaacaaaggat
ctgttggacaaacacaaaaccaacatggacgatctatttggccaaccaaagctaaagtct
gatggtacaccaggcaaaggtatcatattaccaccactcgaacatctccaaagaagttca
aaacatttgaccaaatggattgaatactcgagtcgtgatgccgaagtgacatggatgctc
agagagaatcttcacaaaaagctcatgaccatggaatggattggtcccaattcaaacatg
tgggacttttactatatgatgtggcgaccatttggacagttgctcacagacatggaacgt
cgtggtatgaaggtagatttggagcatctcaaaggagttgaggtcattgcccaaagagat
atcaccgaacacaatgaaaactttcgtcgatgggcattgggctactgtgaaaatgtcaag
catatgaacattgacagtgatgctcaagttcaacagtttttgtttgcaccatgtcgcaat
gtaaagaccaaagaagagatggcacgcgaagaagagtttgaacgtgaaaatgtcgatggc
atcatcgaggaaggtgctaaaaaggcaaagaaaaagattggatttaaattggctggtctg
ggactcccagttccaggtgtcaccaattcaggatggccaagtgtagatgctgcctcgctt
agattactctctggcaaggatccagccaacggaaagtatggaactgcttataatcatttt
gcagttgaccgtctgcctcccaatgccaccgaagaggaaattgaaaaagccaaggaagaa
ggtcgacaggcttgtcttgctattgcttcgttgctcgaagtgggtagtatcggcacgctt
atcagctcgtttattattccactgcagcgattggccgactccaatcatagacttcacact
tcggtcaatgtcaatacggaaacaggtcgtctctcttctcgacgtcccaatctacaaaat
caaccggcactcgaaaaagatcgttacaaaatcagaaaagcatttacctgtgaacctggc
aacacattggtcgtagccgattatggacaactcgaacttcgattattgggacacatcacc
aactgcaagagtatgctcgatgcttttcgtgtcggtggcgatttccattctcgtacggct
atgggcatgtatccacatgttcgtgcagctgtagacgccggtgaagttttactagagtgg
gacggtgaaggagcaccacccaaaccactgctcaaggacaagtttgcatcggaacgtcgt
aaagccaaaacactcaatttctcgattgcctatggcaagactgctcacggtctctccaag
gattggaatgtcaccctcagtgaagcacaaaacactctcaatcgttggtacgaggatcgt
cccgaagtactcttgtggcaacgcagcaccatccaaatagcccatcaaaagaaatggact
agaacattgatgggtcgttacagactcttgcccgatatcgacagcaaggcaagaggattt
gttggacacagcgaaagagcatccatcaacacaccactacaaggtggtgcagcagacatt
gttatgaaggcaatgctcatcattgaacaagacgcaagattaaaggaacttggatatcgt
ctcatcatgcaaattcatgatgaactcattctcgaaggacccgaagaacatgcaccagaa
gcaagagatattgttatcaaattgatgggtaatcctttaaacaaacctcttttggttgat
ttggttgttgattgtcgttttgctaaaacttggtatgaagctaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (212)   
   KEGG ORTHOLOGY (1)   
   RefGene (208)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (231)   

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