KEGG T02136: Desfe

Desulfurococcus fermentans: Desfe_0650

Entry

Desfe_0650 CDS T02136

Definition

ATP-dependent DNA ligase I (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

dfd Desulfurococcus fermentans

Pathway

dfd03030	DNA replication
dfd03410	Base excision repair
dfd03420	Nucleotide excision repair
dfd03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:dfd03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:dfd03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:dfd03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:dfd03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_OB_2

Other DBs

NCBI-GI:

390938388

NCBI-GeneID:

13061023

UniProt:

I3XRH7

Position

complement(617140..618972)

AA seq 610 aa
MSTGRTDIPVRLIADVFERIEVITSRIQMTALLVTLFKQTPPEIIDRVVYLIQGRLWPDW
KELPELGVGEKLLVKAIALATNSSEAQVEDLAKSLGDLGKVAEQLKSRISGRQQGVTLFS
FTQQQPELTVNKVYDTLVRVAMAQGEGSKDLKIRLLAGLLREASPKEAKFIVRFVEGRLR
VGIGEATVMDALAITYGGGVAARQVIERAYNLRADLGKVAKILALNGLEALRNVRPEVGV
PIRPMLAERLSDPKEILEKVGGDAFIEYKYDGERAQIHKKDDKVWIFSRRLENITHQYPD
VVELARDHLKAREVIVEGEIVAYDLDTGELKPFQELMHRKRKHEVRTVLKEYPVKVFLFD
LLYADGRDYTIEPLPVRRGKLLEIVDRTEEFTVAEYIRTSDVKELEKFFLKAISDGAEGV
MVKALHDGSIYQAGTRGWLWIKFKRDYRSEMIDTVDLVVVGAFYGKGRRGGKYGALLMAA
YNDEKDVFETVCKVGSGFKDEDLDKLPEILKPYIRDRKSPRVVAEMEPDVWVEPALVAEI
IGAELTLSPIHTCAYGRIKSDAGLSIRFPRFIRWRPDKRPEDATTSNELVEMYNQQLKKI
AGESKPVEEA

NT seq 1833 nt +upstreamnt +downstreamnt
atgagtactgggcggacagatatcccggtaaggcttatcgccgatgtattcgagcgtata
gaggtaataacctcaaggatccagatgaccgcgctactggtcactctattcaagcagacc
ccaccagagatcattgatcgcgttgtctatctaatacagggcaggctatggcctgactgg
aaagaactcccggagctcggggtaggcgagaagctactggttaaagctatagctctggct
acgaacagtagtgaggcacaggttgaagacctagctaaaagcctcggcgaccttggtaaa
gtagccgagcaattaaaatcaaggatcagcggtagacagcaaggcgtgacattattcagc
ttcactcagcaacaaccggaattaacggttaacaaagtatatgatacactagtaagggtg
gcgatggctcaaggcgagggaagcaaggatctgaaaataaggcttttagccgggctcctc
agggaggcctcacccaaggaggccaagttcatcgtgaggtttgtcgaaggcaggctaagg
gttggaataggcgaggcaacggtcatggatgccctagcaataacttatgggggtggggtg
gctgctagacaggttatcgagagagcgtataatctcagggcggatctcgggaaggtagcc
aagatacttgccttgaatgggttggaagccctcaggaatgttaggccggaggtcggggtc
cctataaggccaatgctggctgagaggctcagcgaccccaaggagatacttgaaaaggtg
ggtggggatgcattcatcgagtacaagtatgatggtgagagagcccagatacataagaag
gatgataaggtatggattttctccaggaggcttgaaaacataacccaccaataccccgat
gtcgttgaattagctagggatcacttaaaggctagagaagtcatcgtggagggtgagata
gtagcatacgacctggatacaggtgagttgaagcctttccaagagcttatgcatagaaag
agaaagcatgaggttcgcacagtacttaaggaataccctgtgaaggtcttcctgtttgat
ctattatatgcggatggacgggactataccatagaacccctcccagttaggaggggtaag
ctattggagatcgtggatagaacagaggagttcacggtggctgagtatataaggacgagc
gatgtaaaagagcttgaaaaattcttcttgaaagccataagcgatggagcggagggtgtt
atggttaaagccttacatgatggctcaatatatcaggctggtacaaggggctggctatgg
ataaagttcaagcgtgactacaggagcgaaatgatcgatacagtagacctagtcgtcgta
ggagccttctatgggaaggggaggagaggcgggaagtacggtgcactactcatggctgcc
tataacgatgagaaagacgtcttcgagacagtgtgcaaggtgggctccggattcaaggac
gaagacctagacaagctcccagagatactgaagccgtatataagagataggaagtcacct
cgcgtggtagccgagatggagcccgatgtatgggttgagccagcacttgtcgctgagatt
attggggccgaattgactctttcaccaatacatacatgcgcctacggcaggattaagagt
gatgcaggcttatccataaggttcccaagattcataaggtggaggcctgacaagaggcct
gaggatgctacaactagtaacgagctcgttgaaatgtataatcagcagttaaagaagata
gctggagagagtaagccggttgaggaagcctag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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