KEGG   Dyadobacter fermentans: Dfer_3297
Entry
Dfer_3297         CDS       T00970                                 
Name
(GenBank) tyrosyl-tRNA synthetase
  KO
K01866  tyrosyl-tRNA synthetase [EC:6.1.1.1]
Organism
dfe  Dyadobacter fermentans
Pathway
dfe00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:dfe00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Dfer_3297
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:dfe01007]
    Dfer_3297
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dfe03016]
    Dfer_3297
   03029 Mitochondrial biogenesis [BR:dfe03029]
    Dfer_3297
Enzymes [BR:dfe01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.1  tyrosine---tRNA ligase
     Dfer_3297
Amino acid related enzymes [BR:dfe01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   Dfer_3297
Transfer RNA biogenesis [BR:dfe03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Dfer_3297
 Prokaryotic type
    Dfer_3297
Mitochondrial biogenesis [BR:dfe03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    Dfer_3297
SSDB
Motif
Pfam: tRNA-synt_1b S4
Other DBs
NCBI-ProteinID: ACT94509
UniProt: C6VRY8
Position
complement(4040422..4041723)
AA seq 433 aa
MAIDFIEELRWRGMLHDMMPGTHEQLQKEMTCGYIGFDPTAPSLHIGNLATIMLLVHFQR
AGHKPIALVGGATGMIGDPSFKAAERSFLDEDTLRINQEGIRKQLESFLDFNSGDNSAEM
VNNYDWFKDIGFLQFLRDAGKYLSVNYMMSKDSVKKRLETGISFTEFSYQLLQGYDFYHL
YKHKNVRLQMGGSDQWGNITTGTEIIRRKEGDDEGYFKAYALTTPLVTKADGSKFGKSEG
GNIWLDPERTSPYQFYQFWLNQSDDDMPRYLRVFSLKGREEIEALETSHAAEPHLRVMQK
ALAAELTIRIHSEKAYQTVLKASEVLFGKATLETLQSIEIDEFDAIFDGVPQTEISREEW
DNAANVLDLVSTVTKSEIYPSKGEARRAIQQNAVSVNKVKVTSEAQVLSEFALLQDKFLL
ISKGKKNHLIRVE
NT seq 1302 nt   +upstreamnt  +downstreamnt
atggcgattgattttatagaggaactacgctggcggggcatgctgcacgacatgatgccg
ggaacacatgagcaacttcaaaaggagatgacatgcggttatatcggtttcgacccgacg
gctccttcgctgcacatcggtaacctggctaccatcatgctcctggtgcatttccagcgc
gcgggccacaagcctatcgcgttggtgggcggcgccacggggatgatcggcgacccgtct
ttcaaggctgccgagcggtcgtttctcgatgaggatacattgcggatcaaccaggagggt
atccgcaagcagctcgaatcgttcctggatttcaattccggcgacaattcggctgaaatg
gtcaataattacgactggttcaaggatataggattcctgcaattcctgcgcgatgcaggc
aagtatttgagtgtcaattacatgatgtccaaagattctgtgaaaaagcgtctggaaacc
ggtatttcgtttaccgagttttcgtaccagcttttgcagggctacgatttttatcattta
tataaacacaaaaacgtccggctgcaaatgggcggctcggaccaatggggcaacattacg
acggggactgagatcatccgccgcaaggaaggcgatgacgaagggtatttcaaagcctac
gcattgaccacgccgctggtgaccaaagccgacggttccaagttcggaaaaagcgagggc
ggcaatatctggctcgacccggaacggacttcgccataccagttttaccagttctggctc
aaccaaagcgacgacgatatgccgcgttacctgcgcgtgttttcgctgaaaggccgcgaa
gaaatcgaagcgctggaaaccagccatgccgctgagccgcatttgcgggtaatgcaaaag
gcattggctgccgagctgacaatccgcattcactccgaaaaagcatatcagacggttctg
aaagcttcggaagttttattcggaaaagcaacgctcgaaactttgcaaagcattgagatt
gatgaatttgatgcgattttcgacggcgttccgcagacggaaatttcgcgtgaagaatgg
gataatgcagctaatgtgctcgatttggtatcaactgttaccaaatctgaaatctaccct
tcaaagggtgaggcccgacgcgcgattcagcaaaatgctgtcagcgtcaataaggtaaaa
gtcacttcggaggcgcaggtattgagcgagtttgcattgcttcaagacaagtttttgctg
atctcaaagggtaagaagaaccatttgatccgggttgaatag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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