KEGG T00970: Dfer

Dyadobacter fermentans: Dfer_3520

Entry

Dfer_3520 CDS T00970

Gene name

murE

Definition

UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

dfe Dyadobacter fermentans

Pathway

dfe00300	Lysine biosynthesis
dfe00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:dfe00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:dfe00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase DUF1537

Other DBs

NCBI-GI:

255037272

NCBI-GeneID:

8227105

UniProt:

C6VTW0

Position

complement(4299061..4300536)

AA seq 491 aa
MENNPILSSLLGEVKGAIIHGYADVTVKNIILDSRKVLPGSLFVALRGTQVDGHQFITTA
ADLGAVAILCEELPEHVREDITYIQVEDSAAAMGHIAAAFYGHPSKKVKLVGVTGTNGKT
SVATFLFQLFRALGYRSGLLSTVQNQIEDEVIPSTHTTPDAVALNALLAQMAARNCSHVF
MEVSSHSVAQHRITGLHFAGGIFTNITHDHLDFHKTFDNYIKAKKGFFDALPKSAFALVN
IDDRRGTVMVQNTKARVETYSLQTLATFKGKIISDTLAGMHMDINSQEVWFRVIGRFNAY
NLLAVYGAAVLLGEKEEAVLTELSNLKSPPGRFEQFHSADLIVGIVDYAHTPDALENVLE
TITHLRNGNEQVVTVVGCGGNRDAEKRPKMAEIACRYSNRVILTSDNPRFEDPMDILDQM
RKGVPPLDYKKTTVIEDRHEAILKAGLEAQPGDIILIAGKGHENYQDVKGVKHHFDDKEV
LMEVFAKRAGN

NT seq 1476 nt +upstreamnt +downstreamnt
atggaaaacaatccaattttgagcagcctgctcggcgaagtgaaaggggccattattcat
ggctatgccgatgtcacggtcaagaatattatcctggattccagaaaagtactgcccgga
agcctgtttgtagcattgcgcggcacgcaggtagacggccaccagtttattaccaccgct
gccgacctcggcgcagtggcaatcctttgtgaagaactgcccgagcatgtcagagaagac
attacctatatccaggtggaggactcggctgcggccatggggcatattgccgccgcattc
tacgggcatccttccaaaaaagtgaagctggtgggcgtaacgggcacaaatggtaaaacc
tcggtggcgaccttcctgtttcagcttttcagggcgctgggctaccgttccggcctgctc
tcgacggtgcagaaccagatcgaagacgaagtgatcccttccacgcacaccacgccagat
gctgttgcattgaatgcattgctggcgcaaatggccgcgcggaattgcagtcatgtattt
atggaagtaagctcgcattccgtggcgcagcaccgcattacaggtttgcatttcgcaggg
ggcatttttaccaacatcacccacgaccacctcgattttcacaagacattcgataattat
atcaaagcaaaaaagggctttttcgacgcgttgccgaaatcggccttcgcattggtgaac
atcgacgaccgccgcggcaccgtgatggtccagaacaccaaagcgcgcgtggaaacctat
tcgctgcaaacgcttgccactttcaagggaaaaatcatttccgacacgctcgcaggcatg
catatggacattaacagccaggaagtatggttccgcgtgatcggccggttcaatgcctac
aatctcctggcagtatacggcgcggcggtgcttctgggcgaaaaggaagaggccgtcttg
accgaattatccaacctgaaaagccctcccggacgctttgaacaattccattcggcagat
ctgatcgtgggtatcgtggattacgcccacacgcccgacgccctcgaaaacgtgctcgaa
acgatcacacatttgcgcaacggcaacgagcaggtggtgacggtggtaggctgcggcggc
aaccgcgacgctgaaaagcgcccgaagatggccgaaatcgcctgccggtacagcaatcgt
gtgatattgacgtcggataatccgcgtttcgaggacccgatggacattctcgaccagatg
cgcaaaggcgtgccgccattggattacaaaaaaaccaccgtgatcgaagaccgccacgag
gccattcttaaagccggactggaagcgcagccgggcgacattatcctcatcgcgggcaag
ggacacgaaaattaccaggatgtaaaaggcgtaaaacaccatttcgacgacaaggaagtg
cttatggaagtgttcgcaaaacgggcgggcaattaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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