KEGG T00970: Dfer

Dyadobacter fermentans: Dfer_4937

Entry

Dfer_4937 CDS T00970

Definition

D-alanine--D-alanine ligase

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

dfe Dyadobacter fermentans

Pathway

dfe00473	D-Alanine metabolism
dfe00550	Peptidoglycan biosynthesis
dfe01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:dfe00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:dfe00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 GARS_A RNase_PH

Other DBs

NCBI-GI:

255038681

NCBI-GeneID:

8228543

UniProt:

C6W6S6

Position

5960874..5962574

AA seq 566 aa
MRIGIFFGGPSREREISYAGGKTAFEYLDKSLFEPVPVFVDSFGRFILLQNELMYLSEIR
EFYPAPGIQKDGFKTYVESFPELAAAPVPSEIGKQINPSEFKQYFDFAFLAMHGPDCEDG
AIQGLLEWYKIPYSGPGLMGSAVGIDKILQNDMIALVNGQEKKSWTLKYSQWVPRDYPLL
FQVLKKHLGLPLVFKAPHQGSSIGVAIVKDDSLEEFIAAVNQCFFQIELTAGTWKELDEA
EKLAWGQKIANLDEGIGFPVILDGKTIYHPTTLISELEIYFSEGNEHALLSSSNAEDQVL
VEEFVSGQEFSCGCIQFDDGSPLALPPSEVIKMVEVFDFNTKYKPGASRKRTPVGTTLEK
NREIQQMIAATFRQLGIDACVRIDGFLKPDGTILLHDPNTIPGMSPTSFIFKQMAEIGLT
VTQALTYLVRQSLRERIRSGKHTWALRALLARLDERINATVAAEKPVENIVFDATDEAYV
EARRRYGLLNAEGKVKPVPVLKAADGQFYQLPNPLMFKEYVSDVEELLHAQRDPLLVETS
QKAAALTRFYAGDVSYEVTRIESPAR

NT seq 1701 nt +upstreamnt +downstreamnt
atgcgtatcggaattttttttggaggtccttcccgcgaacgggaaatatcatatgcaggc
ggaaaaacagcatttgaatacctcgataagtcactttttgagccggtaccggtttttgtg
gacagctttggaaggttcatcctgctgcaaaacgaattgatgtatttgtccgaaatccgc
gagttctaccccgcgccgggcattcaaaaagatggcttcaaaacctacgtcgaatccttt
cccgagctggccgctgctccggtaccttccgaaatcggaaagcaaatcaatccctccgag
ttcaaacaatacttcgacttcgcattcctcgccatgcacggccccgactgcgaagacggc
gcgatccagggcctgctcgaatggtacaaaatcccttacagtggcccgggtttgatgggt
tccgcggttgggattgataaaatattgcaaaatgacatgattgccctcgtgaacgggcag
gaaaaaaagagctggacactcaaatacagccagtgggtccccagggattacccattgctc
ttccaggttttgaagaagcacctcggtttgccattggtattcaaagcaccgcaccagggc
tcgtccattggtgtggccattgtgaaggatgattcgctcgaagaatttatcgcggctgta
aatcaatgctttttccagatagaactgaccgccggaacgtggaaagaactggatgaagct
gaaaaactggcgtggggacaaaaaatcgctaacctcgacgaaggtatcggcttcccggtg
atcctggacggcaaaacgatctatcaccccaccacgctgatcagcgaactggaaatatac
ttttcggaagggaatgagcatgcattactgagcagttccaatgcggaagatcaggtgttg
gtcgaggaatttgtaagcgggcaggagttttcctgcggctgcattcagttcgacgacggt
tcgccgcttgcattgccgccgagcgaggtgatcaaaatggtggaggtttttgattttaat
acaaaatataaacccggcgccagccgcaagcgcactccggtgggcactacactggaaaaa
aaccgcgaaatccagcagatgatcgcggcgaccttccggcaactgggcatcgacgcctgc
gtgcggatcgacggcttcctgaaacccgacggcaccatcctgctccacgacccgaacacc
atcccgggtatgtcgcctacttcctttatattcaagcaaatggcggaaatagggttgact
gtcacccaggcattgacctatctcgtgcggcaatccctgcgcgagcgaatccgctcgggc
aagcacacttgggcgctgcgtgcgttactcgcaaggctcgacgagcgcattaatgctacc
gtcgccgctgaaaaaccagtggaaaacatcgtcttcgacgcaacggatgaagcgtatgtg
gaggcacgccgccggtatggcctcttgaatgcagagggaaaagtgaagccggtgcccgtc
ctcaaagccgctgacggtcagttttaccagctgcctaatccattgatgttcaaggagtat
gtttctgatgtcgaggagttgctccatgcgcagcgcgatccgttgctggtcgaaacttcg
cagaaagcagccgcgctgacccgcttttacgcaggggatgtttcctacgaggtaacccgg
atcgaaagccccgcgcgctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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