KEGG   Dyadobacter fermentans: Dfer_5371
Entry
Dfer_5371         CDS       T00970                                 
Name
(GenBank) cobalamin biosynthesis protein CobD
  KO
K02227  adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
Organism
dfe  Dyadobacter fermentans
Pathway
dfe00860  Porphyrin metabolism
dfe01100  Metabolic pathways
dfe01240  Biosynthesis of cofactors
Module
dfe_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:dfe00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    Dfer_5371
Enzymes [BR:dfe01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.1  Acid-D-ammonia (or amine) ligases (amide synthases)
    6.3.1.10  adenosylcobinamide-phosphate synthase
     Dfer_5371
SSDB
Motif
Pfam: CobD_Cbib AmpE
Other DBs
NCBI-ProteinID: ACT96564
UniProt: C6VU82
Position
6494425..6495330
AA seq 301 aa
MGYLLDLWLGDPDYWPHPVRVFGNAIAWGEKRLNGGRYRFLKGALLSCCLVALVFLVFYG
INVFLLNIKVLYVLFNGMFVYYGLANHSLIAEGRKVFAVLENDGLEAGRKQVGRIVGRDT
SRLSPQQIRIAALETMSENLSDGVVAPLFYYALAGVPGMMAYKMINTMDSMLGYRNERYE
RFGKFAARLDDVANFIPARLTALLMALVAGSGRAVSFLFEYGPRHKSPNAGYPEAALAGI
LNCRFGGPNVYHGRVVEKPFIGEADREIQHGDVRTAANVNHRTCLTMVLMITLGSLIFYL
T
NT seq 906 nt   +upstreamnt  +downstreamnt
atgggttatctgctggatctgtggctcggcgatcccgattactggccacaccccgtccgc
gtgttcgggaatgcgatcgcgtggggggaaaagcggctgaacggggggcggtaccggttt
ttgaaaggtgcattattaagctgttgtctcgtcgcgctggtgtttctggtgttttatggg
ataaatgtctttttgctgaatatcaaggttttatatgtgttgtttaacggcatgtttgtt
tactacgggctggctaatcattcacttatcgccgaaggaaggaaggtttttgcggttctt
gaaaacgatggtttggaggcaggcagaaagcaggttggcaggatcgtagggcgggatact
tcgcggctgagcccgcagcaaatccgcattgcagcgctcgaaacgatgtccgaaaacctg
agtgacggcgttgtcgcgccgcttttttactatgccctggccggtgtgccgggcatgatg
gcctacaagatgatcaacacgatggattcgatgcttggttatcggaacgagcggtatgag
aggttcgggaaatttgcggcccggctggatgatgttgccaactttatcccggccaggctt
accgctttgctcatggcactggtggccggcagcgggcgggccgtcagtttcctgttcgaa
tatggcccccggcacaaaagccccaacgccggctatcctgaagccgcgcttgctggcatt
ttgaactgccgcttcggcggcccgaatgtgtatcacggcagggtggtggagaagccattc
atcggagaagcggaccgggagatacagcacggcgatgtccgtacggcggccaatgtgaat
catcggacgtgcctgacgatggtgctcatgatcacgctaggcagtttgattttttattta
acctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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