KEGG T00970: Dfer

Dyadobacter fermentans: Dfer_5625

Entry

Dfer_5625 CDS T00970

Definition

pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase

Orthology

K00627

pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]

Organism

dfe Dyadobacter fermentans

Pathway

dfe00010	Glycolysis / Gluconeogenesis
dfe00020	Citrate cycle (TCA cycle)
dfe00620	Pyruvate metabolism
dfe01100	Metabolic pathways
dfe01110	Biosynthesis of secondary metabolites
dfe01120	Microbial metabolism in diverse environments

Module

dfe_M00307

Pyruvate oxidation, pyruvate => acetyl-CoA

Class

Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:dfe00010]
Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:dfe00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:dfe00620]

SSDB

Motif

Pfam:

2-oxoacid_dh Biotin_lipoyl E3_binding PYNP_C DUF2118 HlyD_2 Biotin_lipoyl_2 GCV_H HTH_15

Other DBs

NCBI-GI:

255039359

NCBI-GeneID:

8229241

UniProt:

C6VWR5

Position

complement(6761575..6763269)

AA seq 564 aa
MAEVIRMPKMSDTMEEGVIAEWHKKVGDKIKSGEVIAEVETDKATMDLESYWDGTLLYIG
VKKGDAVPIDGIMAIVGNEGEDYQSLLDGASNGNGAATAPAKEESAPAPKEEAPAVETID
AQSAPAAKPAPAPASTEKINAAVVRMPKMSDTMEEGTLVSWQKKVGDKVKSGDILAEVET
DKATMELEAYEDGTLLFVGIKEGEAVPVDAIIAVIGEEGANVEALLARENGEAPAEAEAA
PAQAATSAPTVNGSDKAVSVADSGDRVKASPLAKRLADEKGINLSEVSGSGDNGRIVKRD
VDEFKPAAQASAPAAAPAQTAPAAKAEAAPAAAAPASGDFTDTPISQMRKTIARRLSESL
FTAPHFYVTMEINMDKAMALRPQLNEVATAKISFNDMVIKACAVALKKHPAVNSAWLGDK
IRKYNYVNIGVAVAVDEGLLVPVIREADKKTLSAISGEVKDLAGKAKDKKLQPKDWEGNT
FSVSNLGMFGVDEFTAIINPPDSCILAIGAIKKVAAFKEDGTVYPTNIMKVTLSADHRVV
DGATAAQFLLTVKKLLEEPMSMLV

NT seq 1695 nt +upstreamnt +downstreamnt
atggcagaagtaattcgtatgcccaaaatgagcgacaccatggaagaaggtgttatcgcg
gaatggcacaaaaaagtaggcgataaaattaaatccggtgaagtgattgctgaggtggaa
accgacaaggcgactatggacctggaatcttactgggacggtacccttctttacatcggc
gtgaaaaaaggcgatgcagtacctatcgacggtatcatggcgatcgtaggcaacgaaggc
gaagactaccagtcgctgctcgacggtgccagcaatggcaacggcgctgctaccgcacct
gccaaagaagagtcggcacccgctcctaaggaagaagctcccgctgtggaaaccattgac
gcacaaagcgcgccggcagcgaaacctgcacccgctcctgcatctaccgagaaaattaat
gctgcggtagtgcgtatgccgaaaatgagcgataccatggaagaaggtacgctggtttca
tggcagaaaaaagtaggtgataaagtaaaatcaggcgatatcctggccgaagtcgaaacc
gacaaggctacgatggagctcgaagcatacgaggacggcacattgcttttcgtaggcatt
aaagaaggcgaagcagttcctgtggacgcgatcatcgccgtaatcggtgaagaaggtgcg
aatgtagaagcattgctggcccgcgaaaacggcgaagcgcctgcggaagcggaagcagct
ccggcacaagcagccacttcggcaccgactgtaaatggctccgataaagccgtttcagta
gctgactccggtgaccgtgtgaaagcatcgcccctggcgaaacgcctggccgacgaaaaa
ggcattaacctgagcgaagtgtcaggaagcggcgacaacggacgcatcgtaaaacgcgat
gttgacgaatttaagcctgccgcacaggcatcggctcctgctgctgcccccgcacaaact
gctccggctgccaaagccgaggctgctcccgctgcggctgcccctgcatcaggcgacttt
accgatacgccaatctcgcaaatgcgtaaaaccattgcacgccgcctgagcgaaagcttg
ttcactgcgcctcacttctacgtgaccatggaaatcaacatggacaaggcaatggcactc
cgcccgcagctgaacgaagtggctaccgcgaagatctcattcaacgacatggtgatcaaa
gcatgcgccgtggcattgaaaaaacatcctgccgtaaactccgcgtggctgggtgacaaa
atccggaaatacaattatgtcaacatcggtgtagccgtggcagtggacgaaggtttgctc
gtgccggtaatccgcgaggctgacaagaaaacgctttctgccatttcaggcgaagtaaaa
gacctggccggcaaagcgaaagataaaaaactgcaaccgaaagactgggaaggcaacaca
ttctcggtgtcgaacctcggaatgttcggtgtagacgaatttacagcgatcatcaacccg
ccggattcctgtatcctggcgatcggtgcgatcaagaaagtggctgctttcaaggaagat
ggaacggtttacccgaccaacatcatgaaagtgacgctttccgccgaccaccgcgtggta
gatggcgcaactgctgcccagttccttttgacagtgaaaaaactgttggaagagccaatg
agcatgctggtttaa

All links

Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (29)   

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