KEGG   Deinococcus geothermalis: Dgeo_0442Help
Entry
Dgeo_0442         CDS       T00353                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
dge  Deinococcus geothermalis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:dge00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Dgeo_0442
Enzymes [BR:dge01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Dgeo_0442
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Dgeo_0442
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
455966..456835
Genome map
AA seq 289 aa AA seqDB search
MPELPEVETTRRKIEPLLAGRIILNIAHNAPQRYRDTALAHGRRISGLSRRGKYLILHLV
PPEARSDEPHDLELIVHLGMTGGFRLEEGPHTRVTLTTDAGQLYFNDPRRFGKMAVVPAG
AYGGMPTLAAMGPEPLSDDFREEDFVRRAAWAGAVKPWLLSQKPVSGVGNIYADESLWRA
RIHPAQTNLSAPEAGRLYRAIREVMAEAVAAGGSSLGDGPGNYRQHDGAVGFFQGQHAVY
GRTGQLCPRCGTPIQKMVLAQRGTHFCPACQPLRVEDSQQRHAEGGSHA
NT seq 870 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgaactgcccgaggtcgaaaccacgcgccgcaagatcgagccgctgctcgcgggg
cgcatcatcctcaacattgcccacaacgcaccccagcgctaccgcgacacggccctggcg
catggccgccggatcagcggcctgtcacgccgcggcaagtacctgatcctgcacctggtc
ccgccggaggcgagatcggacgagcctcacgatctcgaactgatcgtgcatctgggcatg
acgggcgggttccggctggaggagggtccccacacccgcgtcacgctcacaaccgacgcg
ggccaactctacttcaatgacccgcgccggtttggcaagatggcggtcgtgcccgcagga
gcgtatggcggcatgcccactctggccgcgatgggaccggaaccgctctcggacgacttc
cgggaggaagacttcgtgcgccgggcggcgtgggccggggccgtcaagccctggctgctt
tcgcaaaagccggtcagcggcgtggggaacatctacgccgatgaaagcctctggcgtgcc
cgaattcaccccgcgcagaccaacctgagtgccccggaggcgggccgtctctaccgcgcc
atccgcgaagtgatggccgaggcggtagcggcgggcggcagctcccttggcgacggccct
ggcaactaccgtcagcatgacggtgcagtgggtttcttccaggggcagcatgccgtctat
ggccgcaccggtcagctctgcccgcgctgcggcacgccgatccagaaaatggtgttggcc
cagcggggaacgcatttctgtccggcgtgtcagccgctgcgggtggaagacagccagcag
cgacacgctgaaggaggttcccatgcctga

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